Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2698 ACTCTTCGTCTTCTGCGTAACATTACCTTCATTTTCTCTTCCTTTCTCAAGGAAAAACCATTTGTTACATTCCCTCGAGTCACAACTTTTTTCAACCAGAAAACAAATTTGAGAAAAAACCAGTATCAAAAAATAATGTCGCTGGATTTTAAACTTCTTTTCTTCCCCAACCTTGTTCAGCAACCTATCTCAACTCTCCATGCTGCTCTTGCTGTGCTCTTCGTGTCCGTTGGTGGGACAGTTATTCCTGGCCCGTCGGGCCTACCTCTACTTGGTCTCCTTCGTGTCTTCATGGGGGAGACACCGCACCGTGTCCTTGCTAAGTTGGCCCAGACCTTTCGGGCCAATAAGCTCATGGGCTTTTCAGTGGGCTTAACCCGGTTCGTCATCTCAAGCGACCCGGCAACTGCTAAAGAGATTCTGGGAAGCCCAGATTTTGCAGACAGGCCCGTAAAAGAGTCGGCTTATGAGCTCCTCTTTCATAGGGCAATGGGGTTCGCACCGTACGGAGAATACTGGAGGAACCTGAGGAGGATCTCGTCGACCCACTTGTTCTGTCAAAAGAGGCTCACGGGCTTCGAAGGGTTCAGGAGATCAGTTGGCTTGAACATGGTGAAAGATTTCAAGTCCATGATGGGAGAGAAGGGACACGTTGAGGTGAAAAAGGTGCTTCATTTCGGGTCCTTGAACAATGTAATGATGATGGTGTTTGGGAAGTGCTATGAATTTTTGAATGGTGATGATGGTAATGGTGTTATGCTTGAAGAGCTTGTTAGTGAAGGGTATGAGTTGTTGGGTGTTTTTAACTGGAATGACCATTTTCCTGTTCTCGGGTGGATGGACCTTCAGGCTGTGAGGAGAAGGTGTAGGTGTTTGGCTTCAAAGGTGAATGTGTTTGTTGGGAAGATTATAGAGGATCATAGGGTGAAGAGGATTTCCGGTGAGTATGTTGCTGGTGAAACCGTTGGAGACTTCGTTGATGTCTTGCTTGATTTGGAGAAAGAGAACAAGCTCACTGATTCTGATATGATTGCTGTTCTTTGGGAAATGATTTTCAGAGGAACGGACACAGTGGCCATCTTACTGGAATGGGTACTTGCAAGAATGGTTCTTCATCCAGATATGCAAGCCAAGGCACAAGGCGAGATTGATGAAGTGGTTGGGTCAAGGCCGGTTTTGGATATTGACATACCCAACCTGCCTTACCTACAGTGCATTGTGAAGGAGGCCCTAAGGTTACACCCACCGGGGCCACTTCTTTCATGGGCCCGTCTTGCCATACGCGATGTCTTCATTGGGGACAAGCTCGTACCGGCTGGAACCACAGCGATGGTTAACATGTGGGCCATAACGCACAATGAAGATGTGTGGCCGGAACCTGACGTATTCAAGCCGGAGAGATTCATGGAAATTGGAAGAGATGTGAATATAATCGGCTGTGATCTTAGGCTTGCTCCTTTTGGTGCTGGGAGAAGGGTGTGCCCAGGAAAGTCCATGGGCCTGGCCACCGTTCACCTCTGGTTTGCTCAGCTTCTCCAGGGCTTTCAGTGGGTCCCGTGTGAGGAAAAGCCTGTGGACTTGTCTGAGTGCCTCAAGCTTTCAATGGAAATGAAGTCGCCCCTTATTTGCAAAGCTGTTCCTAGGGTTGTTGCTTGA 1656 0.4795 TLRLLRNITFIFSSFLKEKPFVTFPRVTTFFNQKTNLRKNQYQKIMSLDFKLLFFPNLVQQPISTLHAALAVLFVSVGGTVIPGPSGLPLLGLLRVFMGETPHRVLAKLAQTFRANKLMGFSVGLTRFVISSDPATAKEILGSPDFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCQKRLTGFEGFRRSVGLNMVKDFKSMMGEKGHVEVKKVLHFGSLNNVMMMVFGKCYEFLNGDDGNGVMLEELVSEGYELLGVFNWNDHFPVLGWMDLQAVRRRCRCLASKVNVFVGKIIEDHRVKRISGEYVAGETVGDFVDVLLDLEKENKLTDSDMIAVLWEMIFRGTDTVAILLEWVLARMVLHPDMQAKAQGEIDEVVGSRPVLDIDIPNLPYLQCIVKEALRLHPPGPLLSWARLAIRDVFIGDKLVPAGTTAMVNMWAITHNEDVWPEPDVFKPERFMEIGRDVNIIGCDLRLAPFGAGRRVCPGKSMGLATVHLWFAQLLQGFQWVPCEEKPVDLSECLKLSMEMKSPLICKAVPRVVA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2698 551 PRINTS P450 superfamily signature 494 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS P450 superfamily signature 485 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 Pfam Cytochrome P450 83 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 487 496 IPR017972 GO:0005506|GO:0016705
Amo05g2698 551 SUPERFAMILY Cytochrome P450 82 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PANTHER CYTOCHROME P450 78A5 52 545 - -
Amo05g2698 551 Gene3D Cytochrome P450 78 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 227 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 484 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 446 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 404 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PRINTS E-class P450 group I signature 494 517 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g2698 551 PANTHER STEROID 21-HYDROXYLASE-RELATED 52 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2698 Amo-Chr5 63553246 63555333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2698 82 551 Cytochrome P450 AT1G13710 66.597 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2698 K20619 - gmx:100804462 705.286