Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2691 ATGCCAACAAAAATCATGGGGGATGAAGAAGGTGGTGATTGTTTTGGAGAGAATAATAATAATAAGAGTAATGAAGAGAATAACAAGTGGCCACCATGGCTGAAACCGCTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGGTGATTCCCACAAAAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCACTTTGTTCTGCTTGTTTGGCTTCTCACAAAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGAGATAACAGGAGTTCAGACATACATAATAAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAACCAAGGCCCGGCAAAGGTGTCACCAACACTTGCCAGGTCTGTGATCGCAGCCTCCTTGATTCCTTCACCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACCTCCAAGAAGTACCAGAAGAAGAAAAAGTTAGATGATGATGATGATTCTGATGGTGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCGTCAACACCACCACCAACGGCGGTTACTTACAGGACTGCTAAGAGGAGAAAGGGTATCCCCCATAGAGCTCCAATGGGGGGAGGACTAATAATAGAATACTAA 687 0.4338 MPTKIMGDEEGGDCFGENNNNKSNEENNKWPPWLKPLLKTSFFVQCKVHGDSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFMEITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFTFCSLGCKIAGTSKKYQKKKKLDDDDDSDGEESMNGSGRNRIQSFTPSTPPPTAVTYRTAKRRKGIPHRAPMGGGLIIEY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2691 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 223 - -
Amo05g2691 228 MobiDBLite consensus disorder prediction 1 30 - -
Amo05g2691 228 MobiDBLite consensus disorder prediction 166 228 - -
Amo05g2691 228 Pfam PLATZ transcription factor 86 157 IPR006734 -
Amo05g2691 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 223 - -
Amo05g2691 228 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2691 Amo-Chr5 63190338 63192841 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo05g2691 PLATZ 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2691 - - gmx:100810757 360.533