Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo05g2686 | ATGGAAAATAAAGAAGCGTTTAGTAAGAGAGAAATAAAGTACAGGTCAATACAACCTTCTGATGAACACACTTTACAGCGTATCCATGACCAACTTTTTCCCATCAGGTATGAATCTAAATTTTACCAAGATGTGGCTAACGGGCGAGGCACCGAGTCGTGGGGAGCCGTAGACGTGAGTCGCAGTGATGGTCAGAGTGATGAACTAATTGGATTTGTGACGACTCGGATTGTTCCTGCAGCAGAAGTTGAGATAGTGAGTATCCATGGAAATGACTTAGCCAAATCAGATGAAACTTTAGTCCATGTTTTAACGCTAGGAGTGGTGAAGGAGTATAGACATCATGGAATAGCTTCTGATCTTCTTAAGAAGGTGATTGAAAATGCTTCTATGATTCAAAGTTGCCGCGCTATTTACTTGCATTCGAGTTCTGAGAACGAGGCAGCAGTCAATCTCTACAAGAAAATGTCTTTCAAGTTAGTAAGAAAGTTGTCAAAGTATTATTCATTCGATGGCAGACATTCAGATGCATACTTATTTGTTTACCCACTCAATGGCGGTCGCTTTCATCGCTGGCCATTCGAAGTTCTGATATCAATGTTGAGCTGTGTGAGGACCGGCTTGGAGTCTTGGGGGACAAAAATGAAGACTGATACATCTCAAAGCAAGAAAAGTGGTACACAACAAAACAGAGGGAAGTTAGCTTGCCATTAG | 714 | 0.416 | MENKEAFSKREIKYRSIQPSDEHTLQRIHDQLFPIRYESKFYQDVANGRGTESWGAVDVSRSDGQSDELIGFVTTRIVPAAEVEIVSIHGNDLAKSDETLVHVLTLGVVKEYRHHGIASDLLKKVIENASMIQSCRAIYLHSSSENEAAVNLYKKMSFKLVRKLSKYYSFDGRHSDAYLFVYPLNGGRFHRWPFEVLISMLSCVRTGLESWGTKMKTDTSQSKKSGTQQNRGKLACH* | 238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo05g2686 | 237 | PANTHER | N-ALPHA-ACETYLTRANSFERASE 60 | 5 | 224 | IPR045141 | GO:0004596 | |
| Amo05g2686 | 237 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 11 | 186 | IPR016181 | - | |
| Amo05g2686 | 237 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 12 | 185 | IPR000182 | GO:0016407 | |
| Amo05g2686 | 237 | MobiDBLite | consensus disorder prediction | 215 | 237 | - | - | |
| Amo05g2686 | 237 | CDD | NAT_SF | 67 | 141 | - | - | |
| Amo05g2686 | 237 | Gene3D | - | 5 | 187 | - | - | |
| Amo05g2686 | 237 | Pfam | Acetyltransferase (GNAT) family | 62 | 158 | IPR000182 | GO:0016407 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo05g2686 | Amo-Chr5 | 63109851 | 63111367 | Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Amo05g2686 | Acetyltransf_1 | 2.6e-12 | CL0257 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo05g2686 | K22767 | - | gmx:100794189 | 232.646 |