Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2684 ATGGCCTCCCCTTCTTCTCCTCCCCAATCCACCCCTCCTCCAGATCCTCCATCTGCGCTCCCCCTCGCTCTTCCCGTTCCTCCCCCCACCGCCTCCTCCTCTCGCCGCCTTCCTCCTCCCTGCTGGTCCCCCGACGAGACCCTTGCCCTAATTGATGCCTACCGTGACAAGTGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACACACTGGCAGGAGGTTGCCGACGCCGTCGCACAGAGATGCCCCAACGCCTCTCCGGCCAAGACCCCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCAGGAAGCGATACCGAACCGAGATCCAGCGCGCAAGGTCCCTTCCTGTGGCGCGATTCAACTCTTCCTGGGTCCACTTCAAGCTCATGGACTCCATGGAGAAAGGTCCCTCACCTGTCAAGCCAGAGAACGACTCCGACAGCCACGACGGCGATGGAGTTGGCGTTGACCGTGACGAAGACGACGACGATCAGGATCTATACGAGGAGATCAAGAACGGAGGACACGGATCTAACACACGGAGCCTCAACAAGTTGTATCGCAACGGTTTTGGCGGTCCTCCCGGCGGTGGAAACGGCAGCGGCGGGTTTAGGATTAGGATCCCTACCGGATTAAGCGTGGCGCAACCTGGATCGAAGTTTTACGGGAAATCTGGTGGAAATCAGAAATTCAATAACCCTAATTTGAATCAGAACGCTGGATCTAACTTCGGGACGAGGGTTTTGGGGAAGAGGGAGAGAGAGAGGGAGAGGGATCCGGTTGGAGAGGTTGTGTCGGCGATCAAGCTGCTTGGAGATGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAAGCCATGCGTATGGAAATGGAGATGAAGCGCACTGAGATGATTCTGGAATCTCAACAGAGGATCGTGGAGGCTTTCGCCAAAGCAGTTTCTGACAAGAAGAAGAAGCCAAAGAAGACTCCATCCCCACAACAATCTTAG 1008 0.5685 MASPSSPPQSTPPPDPPSALPLALPVPPPTASSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVAQRCPNASPAKTPVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKLMDSMEKGPSPVKPENDSDSHDGDGVGVDRDEDDDDQDLYEEIKNGGHGSNTRSLNKLYRNGFGGPPGGGNGSGGFRIRIPTGLSVAQPGSKFYGKSGGNQKFNNPNLNQNAGSNFGTRVLGKRERERERDPVGEVVSAIKLLGDGFVRMEQMKMEMAREIEAMRMEMEMKRTEMILESQQRIVEAFAKAVSDKKKKPKKTPSPQQS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2684 335 MobiDBLite consensus disorder prediction 138 155 - -
Amo05g2684 335 Coils Coil 95 115 - -
Amo05g2684 335 MobiDBLite consensus disorder prediction 1 35 - -
Amo05g2684 335 SMART 118neu2 49 138 IPR006578 -
Amo05g2684 335 Gene3D - 42 107 - -
Amo05g2684 335 MobiDBLite consensus disorder prediction 1 41 - -
Amo05g2684 335 MobiDBLite consensus disorder prediction 134 203 - -
Amo05g2684 335 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 330 IPR044823 -
Amo05g2684 335 PANTHER TRANSCRIPTION FACTOR 4 330 - -
Amo05g2684 335 Coils Coil 282 302 - -
Amo05g2684 335 ProSiteProfiles Myb-like domain profile. 42 102 IPR001005 -
Amo05g2684 335 Pfam Myb/SANT-like DNA-binding domain 40 133 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2684 Amo-Chr5 63088045 63091220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2684 1 133 Trihelix Transcription Factor Family AT3G14180 33.557 3.46e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo05g2684 Myb_DNA-bind_4 3.5e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2684 - - vun:114179736 395.971