Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2679 ATGCTAATTTGGTTTTCTTTGATAAAGGTCAAGATTTCTTCAAAAGTTCCTATTGCACACACCGGAATGTCTTCCGAGGCTGGAATGCCTAGGCATGAAACACAAGGGTTTTCCAGCAGCATTCCTCCCAAGCTGGATGTCTACATTTGGGACATGGATGAGACCCTTATACTGCTCAACTCCTTGCTGAAATCATCATATGCCGAGGGTTTCAACGGTCTCAAGGATGTGCAGAAGGGCGTGGAAATTGGGAAGATGTGGGAAAATCTCATTCTACAATTGTGTGATGACTATTTCTTCTATGAACAAATAGAGAATTTAAATTACCATACTCCATTTCTTGATGCTCTGGTCCGGTATGATGATGGGAGGGACCTATCTAATTATGATTTTAACCATGATGAGTTAGGTCCTCCGGATGATGATGCCAACAAAAGAAAACTTGCCTATAGACATCGAGTCATAGCACAAAAGTACTTACAGGGTTTGCATAATATTTTAGATCACGAGGCGAAGAAATTTTGGGATGAATTGTATGATAAAACTGATGAATATACTGACAGATGGCTGTCTTCAGCACGGACCTTTTTGGAGGAGTGTTCAGGCCAAAACAAAGATTTGGTTTCTTCCATTGCTTTTTCAAGTGTAGTATCTAACACAACCAATGCAAGCCATCAGCATGTAAATGTTTTGGTGACGTCAGGAGGGTTAATACCCTCTCTTGTCAAATGCTTGCTCTTTCGTCTCGACGGTTTAATACCACATGGAAATGTTTATAGCTCTTGTGTAGTGGGAAAAACTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACGATCCGAATGTCCGCTTTTGTGTAATTGGAGATGGATGGGAAGAATGTCAAGCTGCGGAAATCATGAGATGGCCATTTATTAGGATGGACCTGCGGCCAGACAAACTTCATAGGTTCCCTGGTCTCTCATTGACAACAGTTGGCCACTATTTTGCAGTGGTATACGGAAGCCCAGATGATGAGAATGATGCTACCTAG 1032 0.4186 MLIWFSLIKVKISSKVPIAHTGMSSEAGMPRHETQGFSSSIPPKLDVYIWDMDETLILLNSLLKSSYAEGFNGLKDVQKGVEIGKMWENLILQLCDDYFFYEQIENLNYHTPFLDALVRYDDGRDLSNYDFNHDELGPPDDDANKRKLAYRHRVIAQKYLQGLHNILDHEAKKFWDELYDKTDEYTDRWLSSARTFLEECSGQNKDLVSSIAFSSVVSNTTNASHQHVNVLVTSGGLIPSLVKCLLFRLDGLIPHGNVYSSCVVGKTQCFRWIKERFNDPNVRFCVIGDGWEECQAAEIMRWPFIRMDLRPDKLHRFPGLSLTTVGHYFAVVYGSPDDENDAT* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2679 343 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 24 334 - -
Amo05g2679 343 PANTHER EYES ABSENT 24 334 IPR028472 GO:0004725
Amo05g2679 343 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 45 308 - -
Amo05g2679 343 SFLD Haloacid Dehalogenase 45 308 - -
Amo05g2679 343 Gene3D - 46 318 IPR038102 -
Amo05g2679 343 SUPERFAMILY HAD-like 49 305 IPR036412 -
Amo05g2679 343 TIGRFAM EYA-cons_domain: EYA conserved domain 46 325 IPR006545 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2679 Amo-Chr5 62973481 62976643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2679 45 337 Protein tyrosine phosphatase (PTP) family AT2G35320 60.751 6.20e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2679 - K17620 gmx:100799315 518.464