Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2663 ATGGAAAGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGCGACTCGGGTCTCGTTCTCACCACTGACCCCAAACCTCGCCTCCGTTGGACCGTTGAACTCCATGAACGTTTCGTTGATGCTGTTACTCAGCTTGGTGGCCCTGATAAGGCGACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACACTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTCGGGAAGCAGCCCCACAAGGAATTCAACGATCACTCGATTAAGGATGGTATGAGAGCTTCGGCAATAGAACTGCAACGAAACACTGCCTCGTCTTCTGCCATGATTGGCCGTAACATGAACGAGATGCAAATAGAGGTGCAGCGAAGACTCCATGAACAACTTGAGGTGCAAAAACATCTTCAGCTAAGGATTGAGGCACAAGGAAAATACATGCAAAGCATATTGGAAAAGGCGTATCAAACCCTGGCAACTGAGAACATGGGGGCGGTGGCGGCAGCGGCAACGAACATGAAGGGGATTGGAGGCGGAGCCCATGGAATCCCTGACATGGGTGTCATGAAGGACTATGGTTCCCCTCTAAACTTCACATCTTTCCAAGACCTTGACATGTACGGCGGCGGAGGCGGAAATGACCAAATTGACCTTCACCAAAACCTGGAGAAGCCAACCCTTGACGGTAGTGGATTCCTTCCAATCAATGAGGGTCTTTGCCTTGGTGGGAGCAATAACAATAGTAATAACAAGAAGAGGCCAAACCCTTATGGTAGTGGCAACAACACTGGGAAAAGCCCTTTGATTTGGAGTGACGATCTTAGGCTTCAAGATTTGGGAACAGCTTCTTCATGCCTTGGTGATGATCCTTTGTTCAAAGGTGAACAAATCCAGATGGATCATAGAGGAACTCATGAGATTGATCCAATGGCTGAGATCTATGACACAAAGCCTGTTCTTCAAGGTGCTGACGGAGATAACAAGAAATTTGATGCTTCTATGAAGCTTGAAAGGCCTTCACCGAGAAGGATGAGTCCTATGATCAGCACTGGAACCATGGCACTAGGTAGAAGCTCACCATTTGGATGA 1128 0.4787 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASAIELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLATENMGAVAAAATNMKGIGGGAHGIPDMGVMKDYGSPLNFTSFQDLDMYGGGGGNDQIDLHQNLEKPTLDGSGFLPINEGLCLGGSNNNSNNKKRPNPYGSGNNTGKSPLIWSDDLRLQDLGTASSCLGDDPLFKGEQIQMDHRGTHEIDPMAEIYDTKPVLQGADGDNKKFDASMKLERPSPRRMSPMISTGTMALGRSSPFG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2663 375 MobiDBLite consensus disorder prediction 350 375 - -
Amo05g2663 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 332 IPR044848 GO:0003700
Amo05g2663 375 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Amo05g2663 375 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g2663 375 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Amo05g2663 375 MobiDBLite consensus disorder prediction 256 277 - -
Amo05g2663 375 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Amo05g2663 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 332 - -
Amo05g2663 375 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Amo05g2663 375 Gene3D - 34 92 - -
Amo05g2663 375 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2663 Amo-Chr5 61691294 61694215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2663 4 375 G2-like Transcription Factor Family AT1G79430 57.403 1.85e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo05g2663 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2663 - - ccaj:109805894 540.421