Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2655 ATGGGAAGAATCCTCGACATGCTCCCTGAGCTTCTCAACCGAGACCCCGCCACGGACCTCTATCCGATCCTCGATTTCTTCCTCAACGACGTTGGAATCCCTTACCCCGAGCCAACCCTAAAATTCCTGATGAAATTAGGGTTCGCCGGTTCGACTTCCCTCACGTGCCAGAACACTGTGCTACTCGTTTCGAGCGTGGAGGAGACGCTCGTTCCGAAGATCGAGTTCTTGAAATGCTCTTCGGAATCGGAGGTTAATTGCATGGTTGTGAGGTCCCCTGCTTTGTTAACCTACAGTGTAGAGAAGAATTTGAAGCCTAAAGTTGAGTACTTTTTGAATGAGATGAATGGAAATGTTTCAGAGTTGAAGCGGTTTCCGCCGTATTTTAAATTTGGCTTGGAAGGGAGTATTAAGCCAAGGCATAAGGTGTTGGTTGAGAATGGGGTGAAACCACCGTTGCATCTTATATTGAAGGGTGATGATGGTGGGTTCTATGAAACACTGATTAATACCCGGTTAAGAAAGCTTGATGGAAGCATGCTTTCTCATCAAATGGTGGTGGATGGAGAGTGGGTCGGCATGGCTTCATCGGACATAATTTTCGAGAAAATGTTGAAAGTGCAACGAAAGCTTGGTCATTTAAATCCATACTTTTTGTGTTATACAGATAAGAGGGCTGCATGTTATTTGATAAGAAGAGCCATGATCAAATGGATTCCTTCCACTTCCTCCATTTGTAGCCGAAAACACATCTCGCTGTTGCTCGTGTCGCCCACCTCGTTGTCGCTCACGTCGCTCATCTTATCAGCTCACCTCTTTGGTTTCTTGCTTTTGCTCACCTCGCCGTTACTTACCTCTAGGGTAAGAACTCCTCGGCTCCTCCCTCACCCGCGTCTCTCTCCTTGCCACTGCGCGGTTCGTCTACTTTGTCTCTGTCGCCGGCTCGCCGCCAAAATCGTCTTTCTGCTCGCCTCTCCATTCATCCTTGCGACTGATGAGGAACTGAGAATGGGCCTCGCTTATAATGCAAAGAAAAATATTGTTTATGTTGCAGATATTGAAAACCATGCTTTGAGGTATGTGATAGGTCCAGAATAG 1098 0.4681 MGRILDMLPELLNRDPATDLYPILDFFLNDVGIPYPEPTLKFLMKLGFAGSTSLTCQNTVLLVSSVEETLVPKIEFLKCSSESEVNCMVVRSPALLTYSVEKNLKPKVEYFLNEMNGNVSELKRFPPYFKFGLEGSIKPRHKVLVENGVKPPLHLILKGDDGGFYETLINTRLRKLDGSMLSHQMVVDGEWVGMASSDIIFEKMLKVQRKLGHLNPYFLCYTDKRAACYLIRRAMIKWIPSTSSICSRKHISLLLVSPTSLSLTSLILSAHLFGFLLLLTSPLLTSRVRTPRLLPHPRLSPCHCAVRLLCLCRRLAAKIVFLLASPFILATDEELRMGLAYNAKKNIVYVADIENHALRYVIGPE* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2655 365 Pfam mTERF 58 162 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 38 177 - -
Amo05g2655 365 SMART mt_12 2 34 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 SMART mt_12 52 84 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 SMART mt_12 86 118 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 Gene3D Transcription termination factor 3, mitochondrial 1 177 IPR038538 -
Amo05g2655 365 PANTHER CGI-12 PROTEIN-RELATED 1 36 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 PANTHER CGI-12 PROTEIN-RELATED 38 177 IPR003690 GO:0003690|GO:0006355
Amo05g2655 365 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2655 Amo-Chr5 60890747 60893132 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo05g2655 mTERF 9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2655 K15032 - vvi:100247222 197.978