Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2588 ATGACATCTAATATTACAACCTTCAACCTTGGATATGATATGCCAACAATGGCTGCTTCTCTCTCCTCTCTCCTTCTTCCACTAGGTTCTACTTGTAAAAGTTTGAGCTGCAATCCTCAAGGCATTGCGGCTGACAGGCTTCGATGCTTGGTTCTGCAATACCGAAGATCCGTGGTAAAAGCAAAGGCCTCATATACAACTGAATGTGCTGCTATGGTTAATACCAATTCACGCAGAGACTTTCTTGGATTGGCTTTGGGAATCTCAAGCCTCTTTGTTGGTTCATTGGAAGCCAAAGGAGCTGGTTTGCCCCCGGAAGATAAGCCGAAACTATGTGATGAAGCTTGTGAGAAGGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGTCCCCCAGTTGGATTTCAGGTAGCAGCTAATTATGTAGCAATGGTTCCTTCCGGACAAGTATTTGATAGTTCATTGGAGAAAGGCCAGATTTACATTTTCCGTGTCGGTTCTGGTCAGGTGATAAAGGGTCTTGATGAAGGTCTTCTGAGCATGAAAGTAGGAGGGAAGCGTCGACTGTACATACCTGGACCATTGGCATTCCCAAAAGGCCTTACATCAGCTCCAGGGAGACCAAGGGTGGCTCCAAATAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCAGGGCTTGAAGTGGATGAGGAATAA 744 0.4422 MTSNITTFNLGYDMPTMAASLSSLLLPLGSTCKSLSCNPQGIAADRLRCLVLQYRRSVVKAKASYTTECAAMVNTNSRRDFLGLALGISSLFVGSLEAKGAGLPPEDKPKLCDEACEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQVFDSSLEKGQIYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLEVDEE* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2588 247 SUPERFAMILY FKBP-like 113 236 - -
Amo05g2588 247 Gene3D - 107 237 IPR046357 GO:0003755
Amo05g2588 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 148 236 IPR001179 GO:0003755
Amo05g2588 247 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 22 247 - -
Amo05g2588 247 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 22 247 - -
Amo05g2588 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 148 240 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2588 Amo-Chr5 59145186 59148256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2588 129 236 Calmodulin-binding Proteins AT3G25230 36.697 1.03e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2588 K01802 - gmx:100784939 360.533