Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2569 ATGCGAAGCTTGCATATTTGGATCCTTGACTCAAGTTTTGTGGCACCTCTTGTATATGCTTTCATGGGAACCTCAAGAGATATTGCGATAGAACTTGTAGCTGTGGTGTCCTTCTTGCTTGAGAGTTTGCTTTCTAGTGAGATCAGACTTAACTATGCAAAAGGTTCATTTTCATTCATATATGCATTGTCTTTTTTGGTGGTGCTTTGCCTAAAGTATTGTGCTTTCATGAATGGTTATTGTAGGCTTGATTTCTTTATAGATTTCCTATCTCATGCTGCCATTGTGGGTTTCATGGCTGGAGCTTCCATTACTATTGCACTGCAACAACTTAAAGGTCTGTTTGGCATAAAGGACTTCACCACAAAAACTGATATTGTTTCTGTAATGCATTCGGTTTGGAATGATGAACAAGCTCATAAATAA 426 0.3803 MRSLHIWILDSSFVAPLVYAFMGTSRDIAIELVAVVSFLLESLLSSEIRLNYAKGSFSFIYALSFLVVLCLKYCAFMNGYCRLDFFIDFLSHAAIVGFMAGASITIALQQLKGLFGIKDFTTKTDIVSVMHSVWNDEQAHK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2569 141 PANTHER TRANSPORTER, PUTATIVE-RELATED 9 135 - -
Amo05g2569 141 Pfam Sulfate permease family 10 136 IPR011547 GO:0016021
Amo05g2569 141 PANTHER SULFATE TRANSPORTER 9 135 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2569 Amo-Chr5 58350494 58351199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2569 11 135 Inorganic Solute Cotransporters AT1G22150 53.788 6.79e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2569 K17470 - ini:109167296 130.568