Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2555 ATGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATCCGGGAAATAGTTTGAAGAGAAAAGAGAGTGGCGGTGGAGGAAAGTCAACCTTGGAAGAATTGATAAGGGAAGAGAAGAAAAAGGAGAAAATAAACAGGAAAGACCATTGGTTGCGTGAGGGAATCATTGTTAAGGTTATGGGCAAGGCCTTGGCAGAGAAGGGGTACTATAAGCAAAAGGGTGTGGCTATAAATCCTCTGGAGCTATTCATGGATGCTCTAAAGAAAATCCAATCACAATTTTATGAAGACTTTCCACCACATCCACAGGAACAGATCTATGGGTTTGCCACCGCATCAACCATGAAACCAACCCAATGGAGCTATCCTGGAGGTGGAATCAACCAAATTCTAGGGAAATGTACTATTTCAGGAGATGTCAGGTTAACCCCATTTTACAATGTGAAGGATGTAGTGAAGGATGTAGTGACAAAGCTGCAAGAATATGTGGACAACATTAATCTCAACATACATAAGCTAGAAACACGGGGTCCTGTTTCAAAATATGTCTTGCCTGATGATGACTTAAGGGGAACTATTAAGGCTTCCTTTGTATTCTTCTACACCCTTACTCTAACTTTTGATGAGGCAAATTCTAGAGTAGCTTGTGATCTTAATTTCAGAGGCTACCATATTTTGTGCAAAGCAACTGAAGAAGTAGTTGGGCATGTGAAGCCTTACTCAATTACTGGAAGTTTTCCACTCATTCGGGAGCTACAGGATGAAGGTTTTGATGTCCAAACTGCTGGATATGGTCTAATGGATACATACCATGCCCAGAATGAGTACTGCCTTTTTACGGATATGTCTCAAGGGTATCGAATTTTTGCAAGCATCATCGCTCAATTAGAGGAAGATTGA 903 0.4075 MFDEDEEDKYKERNPGNSLKRKESGGGGKSTLEELIREEKKKEKINRKDHWLREGIIVKVMGKALAEKGYYKQKGVAINPLELFMDALKKIQSQFYEDFPPHPQEQIYGFATASTMKPTQWSYPGGGINQILGKCTISGDVRLTPFYNVKDVVKDVVTKLQEYVDNINLNIHKLETRGPVSKYVLPDDDLRGTIKASFVFFYTLTLTFDEANSRVACDLNFRGYHILCKATEEVVGHVKPYSITGSFPLIRELQDEGFDVQTAGYGLMDTYHAQNEYCLFTDMSQGYRIFASIIAQLEED* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2555 300 MobiDBLite consensus disorder prediction 1 19 - -
Amo05g2555 300 Gene3D - 57 168 - -
Amo05g2555 300 Pfam KN17 SH3-like C-terminal domain 47 92 IPR041330 -
Amo05g2555 300 PANTHER ACETYLORNITHINE DEACETYLASE 74 299 - -
Amo05g2555 300 Coils Coil 157 177 - -
Amo05g2555 300 PANTHER - 74 299 - -
Amo05g2555 300 SUPERFAMILY Bacterial exopeptidase dimerisation domain 77 170 IPR036264 -
Amo05g2555 300 MobiDBLite consensus disorder prediction 1 39 - -
Amo05g2555 300 SUPERFAMILY Zn-dependent exopeptidases 215 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2555 Amo-Chr5 57582834 57584917 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2555 1 94 C2H2 Transcription Factor Family AT1G55460 49.505 4.39e-14 70.1