Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2529 ATGAAACTGGCAGTAATTCAATGGCGAAGATGGAGGAACAGCCGTCGTGAGGGTGGCTGGGTGCCTCTCTCTCTCCCCTTGCTATTGCCACACACCCCAGCCATCTTGCACACCTTCGTCTTTATCTTTCCCTTCACGATGGCACGGCCCTCAGCGCCCTTTTTGGCTCTGCATCGCGCGCCGTCGTCACGTTGGGCAATTCTTCCGATATGGATGTCGTCGTCTTCGTCAACTATTTTGGGTGATTCAGGTAGATGTAAGGAAACCTGCGGCAATGTTGCCAATGGGAATGATATTTATGAGGCAAATGTCATATCGGGTAAGATGGGTCAACTCCAAAGAGACATGACAAATCTTAATCAAAGATCTATGGAAGTTGATGATGTTCGTAGTGATTTGAATGAGGTTTTCAAAGATTCCACACCAAAGGATGTTCCTGTAATATCTGGTCATGAGGAGTCCAAAATTTTTCAAGCAAAGTTGCAATTACCCTCTTCTTCCCAAGATTTAAATTCAGATGATGTTTCTGTTCTTGAAGTCTTTTCTATTTATGCTTGTTTAAGGTTATTCAATACTTTATTATTTTTGAGTCCATTTAAGTTGGAGGATCTTGTAGTTGCTTTGAAGTCCAAAATCCTAAGTATATTATTTGATAGCATTCATGTTTCTATTTTGAAAACTCTGAAAAAGCATTTGGAATACCTTTCCAACGAGGATATTCAATCTGCATCTGATTGTCTGAGAAATCTTAATTGA 756 0.4074 MKLAVIQWRRWRNSRREGGWVPLSLPLLLPHTPAILHTFVFIFPFTMARPSAPFLALHRAPSSRWAILPIWMSSSSSTILGDSGRCKETCGNVANGNDIYEANVISGKMGQLQRDMTNLNQRSMEVDDVRSDLNEVFKDSTPKDVPVISGHEESKIFQAKLQLPSSSQDLNSDDVSVLEVFSIYACLRLFNTLLFLSPFKLEDLVVALKSKILSILFDSIHVSILKTLKKHLEYLSNEDIQSASDCLRNLN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2529 251 ProSiteProfiles DDT domain profile. 174 234 IPR018501 -
Amo05g2529 251 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 140 251 - -
Amo05g2529 251 PANTHER PHD FINGER FAMILY PROTEIN 140 251 - -
Amo05g2529 251 Pfam DDT domain 177 230 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2529 Amo-Chr5 55987832 55988784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2529 160 251 PHD Transcription Factor Family AT5G12400 57.609 2.73e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Amo05g2529 DDT 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2529 - - adu:107485507 266.544