Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2528 ATGGGCGGCAGAATTCAAAGTGTCACTACTACTTTTGCTATCATATTGGTTCTCTTAGGCACAGCATGTGATGCACAGTTATCTTCAACATTTTATGATACAACATGCCCCAATGCCCTTTCCACCATTCGAACCTCCATTCGCACGGCGGTTTCTAAGGAGCGCCGCATGGCGGCTTCTCTTGTTCGCCTTCATTTCCATGACTGCTTTGTTCAGGGTTGTGATGCATCAATTTTGCTAGATGATAGCCCCCCCATAATTGTGAGTGAGAAAGGTGCATTACCTAATAATAACTCAGTTAGAGGATTTGAAGTCATAGATCAAGCTAAAGCTGCTGTAGAGAAAGTATGCCCTGGAGTCGTTTCATGCGCTGACATTGTTGCTGTAGCTGCTCGTGATGCATCATTCGCTGTAAGTATATTATGA 426 0.4413 MGGRIQSVTTTFAIILVLLGTACDAQLSSTFYDTTCPNALSTIRTSIRTAVSKERRMAASLVRLHFHDCFVQGCDASILLDDSPPIIVSEKGALPNNNSVRGFEVIDQAKAAVEKVCPGVVSCADIVAVAARDASFAVSIL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2528 141 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PANTHER PEROXIDASE 72-RELATED 8 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 Gene3D - 26 140 - -
Amo05g2528 141 SUPERFAMILY Heme-dependent peroxidases 26 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Amo05g2528 141 Pfam Peroxidase 44 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 PANTHER PEROXIDASE 8 135 - -
Amo05g2528 141 ProSiteProfiles Plant heme peroxidase family profile. 26 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2528 141 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2528 Amo-Chr5 55985123 55986163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2528 14 135 Peroxidase AT1G14550 68.852 6.51e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2528 K00430 - gmx:100811641 203.756