Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2527 ATGAATTTCTCTTGCTGTCAGTCTATCACTAAATTCCCTGATGTGTCTGGAGCAAAAAGTTTAAGAGAATTGATACTTGATGGATGTAAGAAACTGGTTAAGGTTGATGACTCAATTGGTTTTCTTCCTAACCTTGTTTATTTGAGTGCTTCAGAATGCACTCAACTGAAGAGTTTTCTGCTTCAAATCTCTTTGCCATCTCTTGAATATCTTAGCTTTGACTTGTGTAGTAGACTTGCACATTTCCCAGATGTACTGGGAAAGAATGATAAGCCATTAAAAATTTCTCTGAGACATACTGCTTTAAGAGAGCTTTCAGATTCTTTTGCTGAACTTAGTGGACTTGGCTATTTAGATATGACAGGTTGTAAGGAACTAAAATATCTACCAAGTAGCTTATTTATGTTGCCAAATTTTGTCACCTTGAAAATTGGAGGATGTTCCCAACTTCGAGAATTATTAACAAGTTCCAAAGGAAGGCTTTCTGAAGCAGAGCACCGGCCAAAGTTAGAGACCTTGGATTTTAGCAATGCATGTTTGTCAAATGAAGATCTTCATGTAATTATGCAGAGTTTTCCAAACTTGAAAGACTTAAACGTATTGTCAAACTATTTTGTGTCATGCCCAGAAAGCATTAAAGAGTCTATTTGCTTGAGAAGTCTTGATGTGAGCTACTGCCTTAAGCTTCAAGAAATTCCAGAACTTCCCTCTAATGTTCAAAAATTAAATGCAAGACATTGCAATTCCTTGACAGCAGATACGTCAAGCATGCTATGGTCACAGGTGTGTAAAGAGATAAACAAATTACAAGTTTTGATGCCACAGACAGATATTCCAGATTGGTTCGACTATCATGATCAAGGCGGAATTCCAATCTTCTGGGCACGTTGCAAGTTCCCTGCTGTGGCTCTAGCATTCATGTTTGGCAAAATGAACTACCAAGCAGTTGAGCTTCACTTGTTTATCGACAGCGAGCATGTAAATGTCCAGCACCAACACAAGCATACTTTAAATATTGCAGAAAATCATGTGCTTCTGTGTGACCTTCGAGCTTTCTTCAACGATGAGGAATGGGAGAGCCTTGATGCACGCATTGGACATGATAATAACTGGAAGCAAGTTCAGGTGGTGTGTGAACCAGACACAAGCCTAAGAGAATGGGGAGTGTATGTGTACAAAAAAGAAACAAACATGAATGATATCCAATTCACATGTCCATATCATGAGTCCTCAAGGCTACAATCCTTGCTAGTTATTACAAATACTAAAACCATATCAAGAGAGGATGATATGGAAATAGAAAGTGCAAGGGCTTCTGCAAGCTCAGTTGAAGAGACATCAGCTAGTATTGTACAAGCTTTAGAAGCATCATACTCAAAACATGGTGTGCCACATGTTAATTCAAATAGTTGGGCTCAAACTTGTAGCCTCTGCTGCTCAGCATTACTTTCAAGTTACAGGAGACTGCTTTGCTGTACCTGCAGATGTAGGATTGATGATGATGAGCCTTGTGGAGAAGCACGGATGACAAAGGCGCAGCCAGCGCGACTCATGCTAGATGATAATTTAAATTGTTGTGCTCAAACTTGTTGCCTCTGCTTCTCAGCATTACTTTCAAGTTTCAGGAGACTGCTTTGTGGTATCTGTAGTAGGCTTGATAATGATGAGCCTTATGGAGAAGTAAAGATGACAAAGGCACAGCCAGGGCCAATGATTTCAAGACCACAAGAAGAATCAACTGAAAATGTTGATGAGGAGCGTGTTCCTTCTTCCTTCTCACAAAGCCTACAAACTGTGGTGGAAAACTTGAAGAGGCTTACAGCTCCAAGAGAAGACAAAGGTTGGAGCCATGGAGAAGACTGTTATAACTCAGAATTGAGTGATGTTGATTTTGAGGACGATGGGGAAGGAGACTTGGACATGGAAGCATAG 1932 0.3996 MNFSCCQSITKFPDVSGAKSLRELILDGCKKLVKVDDSIGFLPNLVYLSASECTQLKSFLLQISLPSLEYLSFDLCSRLAHFPDVLGKNDKPLKISLRHTALRELSDSFAELSGLGYLDMTGCKELKYLPSSLFMLPNFVTLKIGGCSQLRELLTSSKGRLSEAEHRPKLETLDFSNACLSNEDLHVIMQSFPNLKDLNVLSNYFVSCPESIKESICLRSLDVSYCLKLQEIPELPSNVQKLNARHCNSLTADTSSMLWSQVCKEINKLQVLMPQTDIPDWFDYHDQGGIPIFWARCKFPAVALAFMFGKMNYQAVELHLFIDSEHVNVQHQHKHTLNIAENHVLLCDLRAFFNDEEWESLDARIGHDNNWKQVQVVCEPDTSLREWGVYVYKKETNMNDIQFTCPYHESSRLQSLLVITNTKTISREDDMEIESARASASSVEETSASIVQALEASYSKHGVPHVNSNSWAQTCSLCCSALLSSYRRLLCCTCRCRIDDDEPCGEARMTKAQPARLMLDDNLNCCAQTCCLCFSALLSSFRRLLCGICSRLDNDEPYGEVKMTKAQPGPMISRPQEESTENVDEERVPSSFSQSLQTVVENLKRLTAPREDKGWSHGEDCYNSELSDVDFEDDGEGDLDMEA* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2527 643 MobiDBLite consensus disorder prediction 563 594 - -
Amo05g2527 643 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 428 IPR044974 GO:0006952
Amo05g2527 643 MobiDBLite consensus disorder prediction 608 643 - -
Amo05g2527 643 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 428 - -
Amo05g2527 643 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Amo05g2527 643 Gene3D Ribonuclease Inhibitor 94 277 IPR032675 -
Amo05g2527 643 MobiDBLite consensus disorder prediction 625 643 - -
Amo05g2527 643 SUPERFAMILY L domain-like 2 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2527 Amo-Chr5 55977945 55981197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2527 1 158 WRKY Transcription Factor Family AT4G12020 33.544 4.77e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2527 - - aip:107611979 613.994