Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2507 ATGCCATTCCTCCAAATGAAGCAATTGATACTGTGGAGACGGTTCGTTCGTGCAGCTCAAGGAGTCAGTGAGACCCCTTCGTTGCAACTAGAGTGCTTGACAAACTACATTGCCGAATTGTCTTTGTTGGAGTACAATATGCTTTGTTATGCTCCGTCACTAATAGCTGCTTCTGCAATTTTTCTAGCCAAGTTTATACTCTCCCCCTCAACCAAACCATGGAATGCTACATTGAAGCACTATACACAATACCAGCCTTCTGATTTGTGTAGTTGTGTAAGGGATCTCCATCGACTTTGTTGCAACCATCCTAATTCCAATTTGCCTGCAATTAGGGAAAAGTATAGTCAGCACAAGATATGTTGA 366 0.4235 MPFLQMKQLILWRRFVRAAQGVSETPSLQLECLTNYIAELSLLEYNMLCYAPSLIAASAIFLAKFILSPSTKPWNATLKHYTQYQPSDLCSCVRDLHRLCCNHPNSNLPAIREKYSQHKIC* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2507 121 Gene3D - 9 121 - -
Amo05g2507 121 Pfam Cyclin, C-terminal domain 13 120 IPR004367 -
Amo05g2507 121 PANTHER CYCLIN-A1-1 12 120 - -
Amo05g2507 121 SMART cyclin_7 10 98 IPR013763 -
Amo05g2507 121 PANTHER CYCLINS 12 120 IPR039361 -
Amo05g2507 121 SUPERFAMILY Cyclin-like 12 120 IPR036915 -
Amo05g2507 121 CDD CYCLIN 13 97 IPR013763 -
Amo05g2507 121 SMART Cyclin_C_2 13 121 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2507 Amo-Chr5 53121605 53123092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2507 13 119 Core Cell Cycle Gene Families AT1G44110 68.224 8.15e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2507 K06627 - aip:107648135 242.276