Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2499 ATGGATATCGAAGGAGAAGCAACATACTTTGAAAGTGATGAGGGAGGCCAAAACATGAAAGAGACACAGGAGAATGTAAGTTGCACATGTGCATGTCGTGGAAGCAGTAGATATTGTGGTGTTCTAACAACAGAGGACATAAGGAACCACTCATGGATGACATCTGATGCAGTATATGAGTGCTATGTTAGTTACGCTAAAAGTGTTGGGTTTAGAGTCCGTAAGGGAGATGCTGTTTGTGGCAAACATGGGAAATATAGAAGGCGACGGGAGCACAAGGCAGAGACTCAAACTGGTTGTGAGGCAAAGCTGTCCATGTACCTTGATGAAAGTTCTTCAGTTTGGAGGGTTAGAAAACTACTCGAGGAGCATAATCATGAGTTAATACCACAATGCCTTATCCACCTAATTCCAAATCATCGTCATTTGACCGATGCAAACAAAGCTTAG 450 0.4267 MDIEGEATYFESDEGGQNMKETQENVSCTCACRGSSRYCGVLTTEDIRNHSWMTSDAVYECYVSYAKSVGFRVRKGDAVCGKHGKYRRRREHKAETQTGCEAKLSMYLDESSSVWRVRKLLEEHNHELIPQCLIHLIPNHRHLTDANKA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2499 149 Pfam FAR1 DNA-binding domain 82 129 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2499 Amo-Chr5 52838288 52838800 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g2499 FAR1 2.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2499 - - aip:107606633 268.085