Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2491 ATGGCGATTATGGAAATCAGAAATAAGAGGGTGGTGGAAGATGTTGCAATAATCGGAGGGTTGATCGGAGTCCAATTTATCTACGCAGGGAACGCTTTTCTGATGAGTTATGCTATGTCATTAGGCCTTAACTCTCTTACCATTGTTATTTTCACTTCCCTAGCTACCTTCCTTGTTCTCTTCCCCGTTGCCTTTTATTTTGAAAGGACTAAGTGGCCCAAGGAGTGCAAACTCAAGCTGATTATGCAACTCTTGTTTCTTTCATTTGGAGGACTAGCTTTCCAGTGTCTGTTTCTGAAAGGAATCAATCTAACTTCACCAGCAATGGGAACTGCAATGCCAAACCTTGCACCGGGTCTTATCTTCATCATGTCTTGGACTTTTGGGTTGGAGAGTGTAAACTTAAGGAACACACATAGCAAAGTAAAAATCTTAGGAACACTGCTATGTGTTTTTGGGGCTCTCACAATGAGCATAATGCAAAGCATTTCTGCTCCTCCGGAAACCGGTTTTGAGGCTACAGTTCAATCATCATCGACGCCATTGCAGTTTGTGTTTGACAAGCACAAGATGATTGGCAGCCTCTATCTTGTCGCTGCAGTCTTCATACTGTCGAGCAGCGTCGTCCTGCAGGCTTTTGTTCTTGGAGATTTTGCGGCACCTATGTCCTTGGGTGCAATAACGTCCTTGTTAGGGGCCTTCATGACCGCAGTTTTTCAGTTACTTACAGAGCACCAACTGAAAACTGATTGGCAAGTTCTGCGTTTTAAAGACCTAATTGGCTATTCTTTTCTGGCAGGTGTAGCGAGTGGAATATGTTTATGCTTCAATGGTTGGGCACTTAAGAAGAAAGGACCAGTCTTGGTCTCCATGTTTAGCCCCATTGCTACAGTCTGCTCTGTCATTTTCTCCTTTGTTACCATGAGAGACACTATTAATTTTGGAAGCATTGCAGGTATGTTACTCATGTTCACTGGCCTGTACTTAGTTCTTTGGGCCAAAGACAAAGAAGGCAACGCAAGAGGAAATAATGGCAATGAGATTGAGAAGGCTTTTTTAAGTTGA 1065 0.431 MAIMEIRNKRVVEDVAIIGGLIGVQFIYAGNAFLMSYAMSLGLNSLTIVIFTSLATFLVLFPVAFYFERTKWPKECKLKLIMQLLFLSFGGLAFQCLFLKGINLTSPAMGTAMPNLAPGLIFIMSWTFGLESVNLRNTHSKVKILGTLLCVFGALTMSIMQSISAPPETGFEATVQSSSTPLQFVFDKHKMIGSLYLVAAVFILSSSVVLQAFVLGDFAAPMSLGAITSLLGAFMTAVFQLLTEHQLKTDWQVLRFKDLIGYSFLAGVASGICLCFNGWALKKKGPVLVSMFSPIATVCSVIFSFVTMRDTINFGSIAGMLLMFTGLYLVLWAKDKEGNARGNNGNEIEKAFLS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2491 354 PANTHER WAT1-RELATED PROTEIN 15 344 - -
Amo05g2491 354 PANTHER WAT1-RELATED PROTEIN 15 344 IPR030184 GO:0016021|GO:0022857
Amo05g2491 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 336 - -
Amo05g2491 354 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020|GO:0016021
Amo05g2491 354 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2491 Amo-Chr5 52712239 52714552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2491 3 338 Nodulin-like Gene Family AT5G47470 55.752 3.41e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2491 - - aprc:113870214 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2491 05 52712239 52714552 Amo11g1292 11 44649099 44658950 PCT
Amo11g1292 11 44649099 44658950 Amo05g2491 05 52712239 52714552 PCT