Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2426 ATGGYGAGGAAAGAGAAAGAGTCAATTGGAAGTGCCGGTGCCGATGAGGGTAAYATTACGGGGGTTCGCACTCACGGAGGTCGCTACGTCAAGTACAATCTGTACGGAAAATTCTTCGAACTTCCCGCCAAATATGTACCTCCTATTCGCCCCATTGGTCGAGGCGCTTATGGCCTCGTCTGTGCTGCTGTTGATTCAGAGACTCGGGAAGAAGTTGCCATCAAGAAGATTGCTGATGCCTTTGACAGTCTTACCAATGCCAAGAGGACTTTGAGGGAGATTCTTCTTCTTCGCCACATGGACCACGAAAATATCATYGCCATTAAGGATATCATTCGACCTCCTAAGAAGGACACCTTCAACGATATCTACATTGTCTCTGACTTGATGGACATTGATCTGTACCACGTTCTTCGTTCTGATCAACCTCTTAACCATGACCACTCTCAGTACTTTTTATACCAGCTCTTACGGGGACTGAAATATGTGCATTCCGCTAATGTCTTGCATCGTGATCTTAAGCCTAGTAATATACTTCTCAATGCAAATTGTGACCTTAAAATTGCAGACTTTGGCCTCGCAAGGACCACATCCGAAACCGATTTCATGACTGAATATGTTGTCACCCGATGGTACCGTGCCCCTGAATTACTCCTTAACTGTTCTGATTACACCGCCGCGATTGATGTGTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACTAGAGAACCTTTGTTCCCCGGGAAGGATTATGTTCATCAATTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAAAAGGTATGTTAGACAGCTTCCGCAATGTAGGAAGCAAAAATTCTCTGCCAGATTCCCTAATATGTCTGCGGATGCATTGGACTTGCTAGAAAAAATGCTTATATTTGATCCCMACAAACGCATCACAGTTGATGAGGCACTTAGTCACCCATATCTTTCATCACTTCATGACATAAATGATGAGCCAGTTGGTCCTAGGCCATTCAGCTTTGATTTTGAGCACCCATCATACACCGTAGAGCACATGAAGGATCTTATATGGAGGGAAGCAGTGAAGTTCAATCCAGATCCTCCAGGTCCTTAG 1143 0.4418 MXRKEKESIGSAGADEGNITGVRTHGGRYVKYNLYGKFFELPAKYVPPIRPIGRGAYGLVCAAVDSETREEVAIKKIADAFDSLTNAKRTLREILLLRHMDHENIIAIKDIIRPPKKDTFNDIYIVSDLMDIDLYHVLRSDQPLNHDHSQYFLYQLLRGLKYVHSANVLHRDLKPSNILLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSDYTAAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVRQLPQCRKQKFSARFPNMSADALDLLEKMLIFDPXKRITVDEALSHPYLSSLHDINDEPVGPRPFSFDFEHPSYTVEHMKDLIWREAVKFNPDPPGP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2426 380 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo05g2426 380 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2426 380 Gene3D Phosphorylase Kinase; domain 1 29 369 - -
Amo05g2426 380 Gene3D Transferase(Phosphotransferase) domain 1 130 359 - -
Amo05g2426 380 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Amo05g2426 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Amo05g2426 380 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
Amo05g2426 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Amo05g2426 380 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2426 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Amo05g2426 380 SMART serkin_6 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2426 Amo-Chr5 51828078 51830633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2426 7 375 MAP Kinase Gene Family AT4G01370 75.339 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo05g2426 Pkinase 4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2426 - - egr:104443843 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2426 05 51828078 51830633 Amo13g3412 13 114316056 114318115 PCT