Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2425 ATGGAGATCTGCAAATACCTATCCCAAGAGGGAGTATGCTACGTGAAGAAGGACTTCAATCTTGCGAAGCACCTTGAGATTGATGTGCCTATTCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAATCCAAGGAATTTCCTCACCAACTACGCATCGAGCATCTCAGGACATACCTTAACCTTCCTTCTGAAATCGTCCCTGCCACTCTCAAGAAGCAGGCCAAGCCATTTAGAAGGCCTTTTGGCGGCCACCGAGGGGTTCACCTCGCTTTGAGGGAGAGCACAAATTTGGTGACCGTGATGGATACCGTGGAAGAGACAAGAGTTGTGCTCCTGCTGAGTGCTGACTACAGACCTTCTTTTGGA 366 0.4891 MEICKYLSQEGVCYVKKDFNLAKHLEIDVPILQVIKLMQSFKSKEFPHQLRIEHLRTYLNLPSEIVPATLKKQAKPFRRPFGGHRGVHLALRESTNLVTVMDTVEETRVVLLLSADYRPSFG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2425 122 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 2 46 - -
Amo05g2425 122 PANTHER 40S RIBOSOMAL PROTEIN S10 2 46 IPR037447 -
Amo05g2425 122 Pfam Plectin/S10 domain 2 46 IPR005326 -
Amo05g2425 122 PANTHER 40S RIBOSOMAL PROTEIN S10 52 84 IPR037447 -
Amo05g2425 122 Gene3D - 1 84 IPR036388 -
Amo05g2425 122 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 52 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2425 Amo-Chr5 51808590 51809154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2425 2 75 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 65.517 2.94e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2425 K02947 K09422 zju:107414743 127.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2425 05 51808590 51809154 Amo13g3410 13 114309008 114311717 PCT