Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2414 ATGGATGAACAGAATAAATTCGAACAAGATTTCAGAGATGAATTTACTGAGGGAGCTAAAAATTTTGCGGAGGAAATTGGCAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCAAAGGACTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGAAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCTCGAATGGATCATTTTCAAAGGTGTGTTGCACATTTGCGCTTTAAAGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAGACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGTTGGACCAATGCGGGTGCTAAACATAGAGAATAACGATGATTGCATAAAGTATATTATGTGTAAGCATGGGAGGCCTGATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTGCGAACATATTGTGAAAGTTCTAGTTGACAGAGACATTTGTGAGATTCCCCAGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAACACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAATACCAGAGAGATATGAAGAGACACGTGACCTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAAGCGGTGTAGGCTCAGGACAACCATCTAGGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATATCCTTGGCAAAAGGACATCGACAACAACGTTATTGAAAATGAAGCTAACAGTTCGGATGATGGCGACGTATATCCAGAACCGACGGCTGAGGTTCTACCGGTAATGTTCGTTGTTATCAGCGCCTCCGCGGCCTCTTCCTTCTTTCTGACTAAAAAAAATCCAAAAAAACTATTAGAAAGTTTGGTCGAAAAACTGGATCGGACCTCCTCCACCAATCTTGTCGCAGTCTGTCGGAGTGAGAGACTGCTGCTGCCACCTCCGTTGCACTCAAGAACTTCCATCTTTGTGCTATCGGCATTCGTTACTTCGCTTTCACCATCCCCTGTTCGCTCTCATCAGTCACCTTTTCGCTCTCCATCCCCTTTTCGCTCTCATCAGTCGCCTGTTCGCCGTCGTCCATTGTGCTCAACCACTCTCCATTGTCTATCGAAGGTTAGTGAAAATGGAAGCTCTAACATTTTTGTCAAGCTCCCTCTGCCTCTAAACTTTTTGTTCTGTTTTGATTTAGGTCCCTTTTTGCTTTTCTTATTGCTTCTTGATTTTTCTGAGTCAGACAAAGTTTTAAATCACCTAATATATATATACATCATAATTCATGAGCCACGAAGTATTCACAGACAAAATATAAATATATTGCAATTGCAATCTATTCCCACTCCTGGTCAATAG 1677 0.4079 MDEQNKFEQDFRDEFTEGAKNFAEEIGKYHFSTLQLAFDFYLKYSKSKDFSARKSKTFKNSIGEIYKQKFVCHRQGFREEKYYTMEKRKKEPRLETRTGCEARMDHFQRCVAHLRFKEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPFLSRVGPMRVLNIENNDDCIKYIMCKHGRPDFMWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDICEIPQSLVLDRWTKKVKSTLNDPSGFTRDAVVISRQIPERYEETRDLIMGLYSSYKAADEGTNQPQSGVAKSSNPYVHQSGVGSGQPSRKKRQRCSVCQMEGHKKTTYPWQKDIDNNVIENEANSSDDGDVYPEPTAEVLPVMFVVISASAASSFFLTKKNPKKLLESLVEKLDRTSSTNLVAVCRSERLLLPPPLHSRTSIFVLSAFVTSLSPSPVRSHQSPFRSPSPFRSHQSPVRRRPLCSTTLHCLSKVSENGSSNIFVKLPLPLNFLFCFDLGPFLLFLLLLDFSESDKVLNHLIYIYIIIHEPRSIHRQNINILQLQSIPTPGQ* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2414 558 MobiDBLite consensus disorder prediction 289 324 - -
Amo05g2414 558 Pfam FAR1 DNA-binding domain 39 120 IPR004330 -
Amo05g2414 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 108 IPR031052 GO:0006355
Amo05g2414 558 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 105 252 IPR031052 GO:0006355
Amo05g2414 558 MobiDBLite consensus disorder prediction 289 321 - -
Amo05g2414 558 ProSiteProfiles Zinc finger SWIM-type profile. 189 227 IPR007527 GO:0008270
Amo05g2414 558 PANTHER OS01G0607050 PROTEIN 25 108 - -
Amo05g2414 558 PANTHER OS01G0607050 PROTEIN 105 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2414 Amo-Chr5 51654746 51659803 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g2414 FAR1 1.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2414 - - aip:107607175 477.633