Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2396 ATGAGTTCCAAATTGTACCTTAGTTTCTTCATGCTTATCATGATTGGGTGCATTGTTTCCGTGAGTTCACACAAAACGGTGCACATTGTAGGAGACAATTTCGGTTGGATTCTACCCAAATACACTGGTTTCTACAACGACTGGGCCAAGAACAGAAAATTTTGTGTTGGTGACAAACTTTTGTTCAATTACAAACCCGGGTTGAACACGGTGGTGCAGGTTGAGAAAGACGACTACGATCATTGCTCGATGAAGAAGACTCTGGCTCAGTACTTTATGGGGAACACCACTTTGACGTTGAATCATTGTGGTGACTATTATTTCATCTGCTCCGTTGGCAAGCATTGTGAGGCAACCCAAAAGCTTAAGATCACTGTTACATAA 384 0.4193 MSSKLYLSFFMLIMIGCIVSVSSHKTVHIVGDNFGWILPKYTGFYNDWAKNRKFCVGDKLLFNYKPGLNTVVQVEKDDYDHCSMKKTLAQYFMGNTTLTLNHCGDYYFICSVGKHCEATQKLKITVT* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2396 127 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Amo05g2396 127 PANTHER BLUE COPPER PROTEIN 3 126 IPR039391 GO:0009055
Amo05g2396 127 SUPERFAMILY Cupredoxins 26 126 IPR008972 -
Amo05g2396 127 Gene3D - 26 127 IPR008972 -
Amo05g2396 127 ProSiteProfiles Phytocyanin domain profile. 26 127 IPR003245 GO:0009055
Amo05g2396 127 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Amo05g2396 127 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2396 Amo-Chr5 51348430 51348903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2396 30 126 Phytocyanin Superfamily AT3G20570 39.175 6.39e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2396 - - gmx:102660389 157.532