Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2392 AGGAGGAGGAGGAGTCATTCCAGCTTAATTTTCAAGGTTTGTAAAGCCGCCGGAATGGAACAGTTCCGGCACATTGGAGAGACTCTTGGGAGTTTGAAAGCGCTTATGGTATTGCGAGATGAAATTCAAATCAACCAACGGCAGTGCTGTTTGATCCTTGAAATGTTTAGCTTGGCGTTCGAGACGATTGCAGAGGAGATCAGGCAGAATCTGAAGCTGGAAGAGAGAAGCAGCAAATGGAAGCCTCTGGAGTTGCCTCTGAGAGAGCTTTGCAGGGTTTTCAAGGAAGCCGAGTTGTACATCCGGCAATGTTTGGATTCAAAGGAGTGGTGGGGGAAAGCCATCACCATGTCTAACAATTCTGACTGTGTTGAGTTCCATATCCACAATCTCCTTTGCTGTTTCCCGGCCGTGATCGAGGCCATTGAGAATGCAGGGGAGGCGTGTTGTCTTGATCAGACCGAGAAGGAGAAAAAGAAGGTCATGGTGTCAAGGAAATATGACATGGAATGGAATGATTCCAAGCTTTTCCAATGGAGATTTGGGAAGCAGTACTTGGTCTCTCGGGATATCATCAGCCAATTGGAGAATGCGTGGAAGGAAGATAGGTGGAGGCTCATAGAATCACTCAAGGAGAAGAAAACTACGTCCAAGAAGAACGAGCAGCGGCTCGCCGAGATACTCTTGAAGAAGCTTGTAAATGGATCTGACAGCAAAATGAATCAGGATCTTTGGCCAATCCACGTTCTCGTGGGGGCCAAGGATTACCAGGTGAGGCGAAGATTGGGAAAGGGGAAGGAGTATAAGGAAGTGAGTTGGCTTGGACAGAGTTTTGCATTGAGGTACTTCATTGGAGAGAAGCAAGCCTATGAAGGTGAGATTTCAAAATTGTTATGTCTTTCTCACCCCAACATATTGCAATACCTTTGTGGATTCTACGATGAGGAGAAGAAAGAGTTTAATCTTGTGATGGAGTTGATGAGCAAGGATTTGTGGACCTACATGAAGGAGAATAGCGGTCCAAGGAGGCAGATCTTGTTCTCAATTCCAGTTGTGGTGGATCTCATGCTTCAAATTGCAAGAGGCATGGAGTATCTCCACTCCAAGAAAATCTACCATGGAGATCTTAACCCTTACAGTGTTCTACTCAAAGCAAGGAACTCCCAAGAAGGTTACTTCCATGCAAAAGTCTCAGGATTTGGCCTTCCTTCCCTGAGGAACCGCGATCCGGCACAGAACCCCGAGGACCTGAACCCTAGCATATGGTATGCTCCGGAAGTACTGCACGAGATAGAAAAAGGAGGGAAGGTTTCTACCTGGTGCAAGTACTCGGAGAAAGCAGACGCATACAGCTTTGGAATGATTTGCTTTGAGTTGCTGACAGGGAAAGTCCCTTTCGAAGATAACCACCTTCAAGGGGAGAGAACCACACAGAACATCAAAGCAGGGGAGAGGCCTCTCTTCCCTGGTCGCTCCCCAAAATACCTTGTTAGCTTAATCAAGAAGTGTTGGCAAACCGATCCTTCACAGCGTCCTACTTTCTCTTCTATTTGTAGGATCTTGCGTTACACCAAGAAGTTCCTCTCCACCAGTACTGAGTACTATATCATTAATCCCGAACTTAACAACCTTGAGCTTCAATCTCCACCTGTTGATTGCTGCGATATAGAGACCACTTTCCTTAAGAATCTACCGGAGGAGATGGCGCCACATGTTTCCGCTGTTTCTCAAATTCCTTACCAGATCTATGCTTACAAGGTTGTGGAGAAAGGGAAGATCAGCCTCTTGAATTCAAGAGATAAAGGCAGCGAGACAGAGTTGCCAAAGGAAGATTCTCCTCAAGGAAGCGATGAATTCAGCTTCGCTTTTGAAGATGATCAAGTTTCCGCGGCTGAACCCTTTCAGTTTATAACTTCTCCCAAGTCAGTTCATGGCGGCGAAAAACCGTCTTTTTTCTCCGAAGCACCGGCGAAGAAGACTGTTAGAATAAAGAGCCCAGTGCGAAAACTTGACAAGCTCAAGAAAGACCAAGGAGCGAAATCAATGCCGGCATCTCGCGTTACTTTAAAGGCAAGTAAGGCATATCTGGCGTCACCGGCAGCTAGTCCATTGCACCCTTCACTGAGAAAAAAACCAACACAAGTCTCAGAGACAGAGCGCAACACTCCTAAGAACAACAAAGCTGTGACCACTACTCCTTCGACCCCAATAAGGAGAAGAAAATGCGAAGGGCATCACGTGCCAGAATTCATGGGAAGCCCGAGGGTGAAACCAAGGGATCAGTCGCCATTAATGGCTAACAAGCTGAAGAAGACACCGCTGACAATGACCCCAGGAAGGATAATGGCACGTACAAGCGACGCGCATTTGATACTGCAGAAGAGGCTCTTGATGGGTTCAAGCACAAGCAAAGGAGGAAGATGGGACCATGGAACTGAACACAGGACATCGCTGTCATCATTGGCATTGAGTCCTTTGAGTCCATATGTGATGAGAAGAAGAAGATCAACGGCGACAGCAGCAACATCATGTGGCCACGCCTCTGACTCGGAGAGCACTTGTTCTAAGCACAAAAGAGAGAGCATATCACCATTCGCAATGAGTCCTTTGAGCCCCTACGCTTCCAGAACAACAGCCTGCGGCCATGTCTCCGATTAA 2658 0.4707 RRRRSHSSLIFKVCKAAGMEQFRHIGETLGSLKALMVLRDEIQINQRQCCLILEMFSLAFETIAEEIRQNLKLEERSSKWKPLELPLRELCRVFKEAELYIRQCLDSKEWWGKAITMSNNSDCVEFHIHNLLCCFPAVIEAIENAGEACCLDQTEKEKKKVMVSRKYDMEWNDSKLFQWRFGKQYLVSRDIISQLENAWKEDRWRLIESLKEKKTTSKKNEQRLAEILLKKLVNGSDSKMNQDLWPIHVLVGAKDYQVRRRLGKGKEYKEVSWLGQSFALRYFIGEKQAYEGEISKLLCLSHPNILQYLCGFYDEEKKEFNLVMELMSKDLWTYMKENSGPRRQILFSIPVVVDLMLQIARGMEYLHSKKIYHGDLNPYSVLLKARNSQEGYFHAKVSGFGLPSLRNRDPAQNPEDLNPSIWYAPEVLHEIEKGGKVSTWCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGERTTQNIKAGERPLFPGRSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSTSTEYYIINPELNNLELQSPPVDCCDIETTFLKNLPEEMAPHVSAVSQIPYQIYAYKVVEKGKISLLNSRDKGSETELPKEDSPQGSDEFSFAFEDDQVSAAEPFQFITSPKSVHGGEKPSFFSEAPAKKTVRIKSPVRKLDKLKKDQGAKSMPASRVTLKASKAYLASPAASPLHPSLRKKPTQVSETERNTPKNNKAVTTTPSTPIRRRKCEGHHVPEFMGSPRVKPRDQSPLMANKLKKTPLTMTPGRIMARTSDAHLILQKRLLMGSSTSKGGRWDHGTEHRTSLSSLALSPLSPYVMRRRRSTATAATSCGHASDSESTCSKHKRESISPFAMSPLSPYASRTTACGHVSD* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2392 885 Pfam Protein tyrosine and serine/threonine kinase 287 520 IPR001245 GO:0004672|GO:0006468
Amo05g2392 885 ProSiteProfiles Protein kinase domain profile. 256 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2392 885 Gene3D Transferase(Phosphotransferase) domain 1 248 543 - -
Amo05g2392 885 SUPERFAMILY Protein kinase-like (PK-like) 248 530 IPR011009 -
Amo05g2392 885 MobiDBLite consensus disorder prediction 698 739 - -
Amo05g2392 885 MobiDBLite consensus disorder prediction 868 885 - -
Amo05g2392 885 MobiDBLite consensus disorder prediction 718 737 - -
Amo05g2392 885 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 19 692 - -
Amo05g2392 885 PANTHER SERINE-THREONINE PROTEIN KINASE 19 692 - -
Amo05g2392 885 MobiDBLite consensus disorder prediction 599 619 - -
Amo05g2392 885 Pfam Protein of unknown function (DUF1221) 39 252 IPR010632 -
Amo05g2392 885 MobiDBLite consensus disorder prediction 837 885 - -
Amo05g2392 885 MobiDBLite consensus disorder prediction 599 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2392 Amo-Chr5 51300920 51303750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2392 255 534 MAP Kinase Kinase Kinase AT1G14000 32.226 6.81e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Amo05g2392 PK_Tyr_Ser-Thr 1.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2392 - - cam:101509043 1003.05