Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2304 ATGGTTGATTCAACGTCAGATTCTCAGCTGAATCAGGGTGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGGCTCTTTCTGTTGTTGATGACCAGTTTATTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGTTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACAAATCCGACAGTCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGCTGCCGGTGGTCACTGCGAGTTAAATTTT 558 0.4265 MVDSTSDSQLNQGEVDYEFESNEVPEALSVVDDQFIPKVGMTFTTLEDAGKFYRNYAKVAGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTVGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAGIRPSKTYQSFVAAAGGHCELNF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2304 186 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo05g2304 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2304 Amo-Chr5 49424949 49425959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g2304 FAR1 1.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2304 - - adu:110278638 347.436