Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2287 ATGGGAGTAACCTTCCTCCTCCAGAAAGCCATCCACTTCGGAACCGGCCATAACTACCTCCAGCTCCTCATGTTCATGGGAGTATCCCTCTCCATTACCGCTTTTCCTGTGCTCGCCCGCATCTTAGCAGAGCTCAAGCTCCTCACCACACAAGTAGGAGAAACTGCCATGGCCGCCGCCGCCTTCAATGATGTTGCGGCCTGGGTTCTCTTGGCCTTGGCAATCGCCTTGGCCGATGGACAACACAAAAGCTCACCCCTCACATCTATTTGGGTTCTCATTTCAGGGGTGGCGTTTGTTGCATTCGTATTGGTCCTTGTTAGACCCTTTATGAACTGGGTAGCACGCCAGTGGTCACGTCAACGCCAAGTCTTTGACGAAGCGAGCATATGTTTAACCCTCGCGGGGGTTATGATAGCAGGCTTTGTCACTGACCTCATTGGGATACACTCAATCTTTGGAGCCTTTGTTTTCGGGATCACGATCCCAAAGAAGGGCGAGTTTGCGAGCAGCGTCGCAAAGAGGATCGAGGACTTTGTCACGGTGCTGTTGCTTCCGTTGTACTTCGCCTCGAGCGGGTTGAAAACCGACGTTGCTAAGTTGCATGGAATGGAAGAGTGGGGGCTTTTGGTGCTGGTCATAGTGARGGCGTGCGTCGGAAAAATCTTGGGGACATTTACGGTGGCCATGATGAGCATGATACCTGTGAGGGAATCTCTTACTCTTGGATTCTTGATGAACACCAAAGGGTTGGTGGAGCTTATTGTTCTCAACATTGGCAAAGAGAAAAAGGTACTTAACGATGAGGTGTTTGCCATCCTAGTGCTAATGGCTCTTTTCACCACCTTCATCACAACGCCAATAGTCTTAGCAATATACCCACCCTCGCGTCCCAGCAAACAAAACCGGGCAGGACCGCGAGACGACCTTAGCATCCTTGCATGCGTCCACGACCACCACACTTGCAACATACCCTCRCTAATAAGCTTCATTGAATCCATTCGACCAAACACCACCACCACCACCAATCTCAAATTGTACGTTATGAAACTRGTCGAGCTCACAGACCGATCCACCTCCATCTTGACCGTTCAACGCAGCCGCAGGAACGGCTTCCCCGAAGGATCAGAAAGTTCCATGCACGACCAAGTTGTGGCCGCTTTCAAAGCTTACCACGGTGTAGGCCAAGTGAGATTGCGTCATTTGAGGTCAGTGTCGGCGCTGTCAACGATGCAAGAGGACATATGTCATGTTGCGGAGAAGCATGGAGTGGGAATGATCATAATTCCATTCCATAAAAGGTGGCGGAGAGGGGAACAAGATGAAGATGATGAAGAAGCAATTGAGATAGGCCAAGGGTGGAGGGAAGTCAACCAAACGGTGCTTCAAACCGCACCATGCTCGGTGGCGGTGCTTGTCAACCGTGGAGTTGGTACATGGCTTCAACCAGGTGCAACTGATGCAACCATGAGGGTTTGCATAGTTTTCATAGGTGGATTGGATGATCGTATGGCTTTAAATTTGGGTGCAAGAATGGCACAACATCCAGCAATAACGTTGTCTCTGGTGAGATTCATGTCAGCAGAGGATTGGGAAACAGACAAGGAGCTAGACGAGGTGGCAGTGAATGAGTTCAAAGCAAAGTTGGAGGAGTCAGTGACGTACATTGAAAAGGACGCAAGCAGCATAACAGAGGAGGTCTTAAGAATTGGAAAATCTAAGGAGTATGAGCTACTGATAGTGGGGAAAGGAAATCAGCTTCCKGAGTCATCCATGGAAGATTCTCGACTCGAGCATGCTGAGCTGGGGCACATGGGAAATCTCTTAACCTCCTCAGCAATGGGTATTACAAGTTCTGTGCTCGTTATACAAGACCAGCAATTGGTAACTTCTAATGAAACTGAACTCAGAAAGATGGCTAGCGTCTTGTGA 1932 0.4938 MGVTFLLQKAIHFGTGHNYLQLLMFMGVSLSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWVLLALAIALADGQHKSSPLTSIWVLISGVAFVAFVLVLVRPFMNWVARQWSRQRQVFDEASICLTLAGVMIAGFVTDLIGIHSIFGAFVFGITIPKKGEFASSVAKRIEDFVTVLLLPLYFASSGLKTDVAKLHGMEEWGLLVLVIVXACVGKILGTFTVAMMSMIPVRESLTLGFLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPIVLAIYPPSRPSKQNRAGPRDDLSILACVHDHHTCNIPSLISFIESIRPNTTTTTNLKLYVMKLVELTDRSTSILTVQRSRRNGFPEGSESSMHDQVVAAFKAYHGVGQVRLRHLRSVSALSTMQEDICHVAEKHGVGMIIIPFHKRWRRGEQDEDDEEAIEIGQGWREVNQTVLQTAPCSVAVLVNRGVGTWLQPGATDATMRVCIVFIGGLDDRMALNLGARMAQHPAITLSLVRFMSAEDWETDKELDEVAVNEFKAKLEESVTYIEKDASSITEEVLRIGKSKEYELLIVGKGNQLPESSMEDSRLEHAELGHMGNLLTSSAMGITSSVLVIQDQQLVTSNETELRKMASVL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2287 643 PANTHER CATION/H + ANTIPORTER 1 639 - -
Amo05g2287 643 Pfam Sodium/hydrogen exchanger family 20 289 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo05g2287 643 PANTHER CATION/H+ EXCHANGER 3 1 639 - -
Amo05g2287 643 Gene3D - 1 300 IPR038770 -
Amo05g2287 643 Gene3D - 346 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2287 Amo-Chr5 48738113 48748754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2287 1 641 Antiporter Super Family AT3G53720 52.143 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2287 - - gmx:100799165 715.687