Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2283 ATGTGTGACTCCATAGGTTCAACACTAAGCGGATATGCTCAATTCAAGTTTGGGAGTCTCGAGCAAGACACTGATGATTCCAGAATTGCATCTCCAGTTGCTAAGCAATTTTTTGCACTAGAAAACAAAATGTTAGCAGTTAAATTTTATTATACAATTGAGTTTAGAATTGCTACTGCTGAAGGTAGAATTGTTGAGCAAAAATACAAGTTAAGACATCCAAAAACATTTCATTATCTGAACCAATCAAACTGCAATGAGTTAGAAGGGATTGACGAATATAAAGAATATATAGCTACAAGGAGAGCAATAGATGTTATTGGAATGAGTTCTGAGGAACAGAGTATTGCTATAGAATATCTATGGTAA 369 0.3415 MCDSIGSTLSGYAQFKFGSLEQDTDDSRIASPVAKQFFALENKMLAVKFYYTIEFRIATAEGRIVEQKYKLRHPKTFHYLNQSNCNELEGIDEYKEYIATRRAIDVIGMSSEEQSIAIEYLW* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2283 122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 116 IPR027417 -
Amo05g2283 122 PANTHER MYOSIN-6-LIKE ISOFORM X1 57 115 - -
Amo05g2283 122 Gene3D - 48 108 - -
Amo05g2283 122 Pfam Myosin head (motor domain) 53 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo05g2283 122 PANTHER MYOSIN 57 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2283 Amo-Chr5 48701743 48705404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2283 67 114 Myosins gene family AT1G54560 68.750 7.74e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2283 K10357 - pvy:116146869 82.8037