Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2275 ATGTCACTGCCACCGTCGCCGCCGTCTTGTCGCTGTCGGGAGAGTAATAACCGTCGCTGCCAGTGGAGGGGAGCCTGGCTGTCCTCGTCACTGCCAGCTCCGTCGCCGTCGTCACCATTGGAGCTGCGCGAAGCCGTCGTCGCCGTTGTCACCATCGATGCTTCTCGTTGTCGTTTGTGGGTTGTCGCCTCTTCTGCTTCTGCTGTCACGCTGTCGTCTGCCCCTCTGGACATCGCTGCTTTTGAATCGTGTCCTGTCACTCGGATATGCTGCAAGAAGCTATCAGAAAGTGGCATTGATGAGAAGAAGCACAAACCCTCCACCAGCAATACCGCTGCCTCTAAATCCAAGGACGGAATGGAAGATTACAATTTTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACGATCTGGGTTTGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAACCACAGAAACATGAAGACATCGATCACCTCAGGAAGGAAGAGGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATATCAAGAGTGGTTCCTCCACTGAGTTTCTCAATCATTTCCAAAATTTCCCTGCTTGGGGTCATAGGATGTTCATCACAGATGCTGGGCTATGCTGGAATTAG 654 0.5015 MSLPPSPPSCRCRESNNRRCQWRGAWLSSSLPAPSPSSPLELREAVVAVVTIDASRCRLWVVASSASAVTLSSAPLDIAAFESCPVTRICCKKLSESGIDEKKHKPSTSNTAASKSKDGMEDYNFAMKRMMRNPYEYHHDLGLNYTLITDNLIVGSQPQKHEDIDHLRKEEGVTYILNLQQDKDIKSGSSTEFLNHFQNFPAWGHRMFITDAGLCWN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2275 217 Gene3D Protein tyrosine phosphatase superfamily 127 209 IPR029021 -
Amo05g2275 217 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 86 186 - -
Amo05g2275 217 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 86 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2275 Amo-Chr5 48551457 48552668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2275 106 186 Protein tyrosine phosphatase (PTP) family AT3G10940 72.840 6.50e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2275 - - aip:110271941 328.176