Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2265 ATGAAAGCAATCCAATTCCGTATGCCTAGGTTGTACTATGACACATTTCATCCCACAATCCACTTCCAGATACCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTGCAGCATAGTCCAATCTCACCACCCCAATTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTGCTGCTCTTACTTTCCAAAAACTTCACCTTCCTTCTGCTGAAAGACCAGACTCAGTTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAATGCCCATTGTTCCTCTTAGCAAACCCAAATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCCGGAGCTTGGAGAAACAGATTATACCCTCTTACAATTTCCTCAAGAGTGTGTTGATTTCTGATGAAAAGGATCACAAGAAGAACCTCGTACCAAACCCCAATCTCCTAAAAGAGATGGATGTTCCTAAATCATGTGTTACGCTATTGCTGACTCATTTCCCGGAGGCATTGATGCAGAAAAAGAAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAAGACAACTTTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAATAAATCCATATATAACTGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCCACTTTGGGAGGTGGAAGGAAAGGTGGTCAGGGGTGGAATTGGAATGGAAGGAGGGGGTGCGGTGGAAGTGGGAGGAATGAAGGTGAGAGAGAGAAGCAGGAGCAGAGAAGGGAGATGGAAAGGTGGAAGAAGAGGAAATGGGTTAATTTTGTCTTTGTCAAAATAAAAAAGAGACATAATTTATGA 954 0.4308 MKAIQFRMPRLYYDTFHPTIHFQIPSSSLSLPKPMISRCSIVQSHHPNFTISYLIDSCGLSPDTAALTFQKLHLPSAERPDSVLTLLREHGFTDTQISNLIRKCPLFLLANPNILLPKFQFFLSIGISNTNLARTLTADPTLLTRSLEKQIIPSYNFLKSVLISDEKDHKKNLVPNPNLLKEMDVPKSCVTLLLTHFPEALMQKKKNFAKLSKEIKEMGFNPKKTTFVLAIHVLSGEGNKSIYNCCYEVYKRWGWSTLGGGRKGGQGWNWNGRRGCGGSGRNEGEREKQEQRREMERWKKRKWVNFVFVKIKKRHNL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2265 317 PANTHER CGI-12 PROTEIN-RELATED 30 256 IPR003690 GO:0003690|GO:0006355
Amo05g2265 317 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 256 - -
Amo05g2265 317 MobiDBLite consensus disorder prediction 270 293 - -
Amo05g2265 317 Coils Coil 281 301 - -
Amo05g2265 317 MobiDBLite consensus disorder prediction 279 293 - -
Amo05g2265 317 Gene3D Transcription termination factor 3, mitochondrial 50 170 IPR038538 -
Amo05g2265 317 Pfam mTERF 84 172 IPR003690 GO:0003690|GO:0006355
Amo05g2265 317 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Amo05g2265 317 SMART mt_12 191 221 IPR003690 GO:0003690|GO:0006355
Amo05g2265 317 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2265 Amo-Chr5 48349165 48350160 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo05g2265 mTERF 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2265 K15032 - ahf:112805356 459.144