Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2239 ATGCCAACAAAAATCATGGGGGATGAAGAAGGTGGTGATTGTTTTGGAGAGAATAATAATAAGAGTAATGAAGAGAATAACAAGTGGCCACCATGGCTGAAACCGCTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGGTGATTCCCACAAGAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCACTTTGTTCTGCTTGTTTGGCTTCTCACAAAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGAGATAACAGGAGTTCAGACATACATAATTAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAACCAAGGCCTGGCAAAGGTGTTACCAACACTTGCCAGGTCTGTGATCGCAGCCTCCTTGATTCCTTCTCCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACCTCGAAGAAGTACCAGAAGAAGAAAAAGTTAGATGATGATGATGATTCTGATGGTGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCGTCGACACCACCACCAACGGCAGTTACTTACAGGAATGCTAAGAGGAGAAAGGGTATCCCCCATAGAGCTCCAATGGGGGGAGGACTAATAATAGAATACTAA 684 0.4327 MPTKIMGDEEGGDCFGENNNKSNEENNKWPPWLKPLLKTSFFVQCKVHGDSHKSECNMYCLDCMNGALCSACLASHKDHRAIQIRRSSYHDVIRVSEIQKFMEITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIAGTSKKYQKKKKLDDDDDSDGEESMNGSGRNRIQSFTPSTPPPTAVTYRNAKRRKGIPHRAPMGGGLIIEY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2239 227 MobiDBLite consensus disorder prediction 165 227 - -
Amo05g2239 227 MobiDBLite consensus disorder prediction 1 28 - -
Amo05g2239 227 Pfam PLATZ transcription factor 85 156 IPR006734 -
Amo05g2239 227 MobiDBLite consensus disorder prediction 182 202 - -
Amo05g2239 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 222 - -
Amo05g2239 227 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2239 Amo-Chr5 48063217 48065609 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo05g2239 PLATZ 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2239 - - gmx:100792668 359.762