Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2211 ATGAGTACTGTTGGATACAGGTCAGATGATGAATGCTCTTATGTTGGAGGAAAGGGAGAAATCGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTTTGTAGTTACGCTGCTATTGATGATGGCGATCCGGTTATCATATCCATCCCATTTGCATTTGTGGATGGGAAGCCTCAATCAGTGTTTGTTGGAGATACTGCTGTGGATTTAATAACCATCAATAATACCACCAAAGAGCCTGTGCAGTTGTGGACTGTTCATATTTTTGCCTCAAATCCTCAGAACACTTTCACTCTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATTCAAATGGAGATTCAGATGAGGGCTTTCTCGAATCATTTGRWTTGGAGGATAGAATGCTTCAGCCTGGTGAGATTTTAAAARTATGGTTGTCTTGCAAGACAAAAGAAATGGGCATGTACCAATCAATTGTGCATTTTGATGTTGGAGAAGAAAGAATAGAAAGGGTGGTTTTTGTCTTAGTTGAAGACAAGATTTCGAAATCGTTGGCTTCTAAGAGGCCTTATTCTCGACAAAGAAGAAAAGACAAATTTGCAGTAGATAATTTCGTCGCAGGCTCACGTCCTGCAGGGAAAACAAATCGGGCCTACATTAATAGGCTTCCAAAATATGATATTCCCGGGGATATTAGACACTTGCTTGAGAGCAATCAGATCCCTGAAGCTGTTGAAGGTGGTCTAACAAGAAAGAATTATGCTTCTTTTTTCAAAACATTGGTGATAATGGAAGAAATACAATTAGAGGAAGACATGAGGACTTATGACATGGAATGCGTAACAATGAGGAAGAGACCCAATCAATTTTTGTCCATGTTGGTTCCTGGGCTTGCTGAGAGAAGACCATCACTGGTTCATGGGGATTTCATCTTTGCCAAACTAGCATCTGAAAATGATAAGAACACTGGACGCCCTTATCAGGGATTTATCCATCGTGTTGAAGCTGATGAGATCTTTTTGAAGTTTGATAATGAATTTCACCTGCGCCATAGAGATGGAAATCTTTATGATGTTCACTTCACCTACAATAGGATCAATATGAGAAGGTTGTATCAAGCAGTTGAGGCAGCCAGTGGCTTAGGATCCGAGTTCCTTTTTCCATCTACTTTAGCCAGGAAGAGGTTCATTGAAACCACTGATCTGATTCCCATATCTGGTRCTTTTAATGATGAGCARATTTCTTCAATCAAAAGTATTSTTGGTTGCAAAGGGGCGCCACCATATCTGATTTATGGGCCTCCAGGTACGGGAAAGACTAAGACAATAGTAGAAGCAGTTCTCCAGCTCTACAAACATAATAAGGATGCCCGTATTCTTGTCTGTGCACCATCAAATAGTGCAGCAGACCACATATTAGAGAAACTGCTTGCTGAGAAGTCTGTTGAATTTCAAGAAAATGAAATATTCAGGCTCAATGCTTCTACCAGGCCATATGAGGATGTCAAACCTGAAATTATCCGTTTCTGCTTCTTTGATGAGTTGATATTTAAATGCCCGCCAGTCAGTGCCCTCAGGCATTATAGGATTATAATATCAACATATATGAGTGCCTGTCTTCTTTATGCAGAAGATGTTTCACGGGGTCATTTCTCTCACATTTTCTTGGATGAGGCTGGCCAAGCCTCAGAACCTGAAACCATGATCCCTATATCCCATCTCTGCAGAAGGGAAACTGTTGTTGTTCTAGCTGGAGACCCAATGCAGTTGGGTCCAGTAATTTATTCGAAGAAAGCAGATACACATGGATTGGGGACATCATACCTGGCACGACTGTTTCAATGTGAGATGTATGCAACTGGAGATGCAAATTATGCAACGACATTGGTTAATAATTATCGATGCCATCCAGAGATATTACATCTCCCTTCAAAGCTGTTTTATAATGGGGCGTTGATTGCATGCAGAGACAAGACAACCTTCATGGTGAGTCCTGGCTTCCTCCCTAATGAGGAGTTTCCCRTTCTTTTCTTTGGCATCCAAGGATGTGATGAAAGAGAAGGGAATAACCCCTCATGGTTCAACCGAATTGAAGTGAGCAAAGTTGTCGAAGTTGTCAAGAGGCTGACAGCTGGTGGGAATATAATGGAGGAACACATTGGCATAATAGCACCATATAGGCAACAAGTACTCAAAATTAAACAGACTCTTGAAAATCAAGAGATGCCTGATATCAAAGTTGGTAGTGTTGAACAGTTTCAAGGACAAGAGAAGGAAGTTATTATCATATCAACTGTTCGATCAACCATCAAACACAATGAGTTTGACAGAGTCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTGTAACTCGTGCCATATCATTGTTGGTTATCATCGGGAATCCACACATTATCTGCAAGGACAATTATTGGAGCCAAATGCTGTGGCACTGCGTAGACAATAAATCTTATCAGGGTTGTAAACTTCCTGATAGGCCAAAGACTTATGTTGAGGACGCTGGAGACAACAATGTGAAGCCTTATGGAGAGGTCAATGGAGAGGACTCTGTAGAATGGGGTCAAGATTTATCCCAGGTGGAGATTCCCAAACCTGTTACTGATGAGGCTGAATGGTCTGATGGCTGGAGAAGTAGTTGA 2652 0.4103 MSTVGYRSDDECSYVGGKGEIGFLDFEEEKSVCSYAAIDDGDPVIISIPFAFVDGKPQSVFVGDTAVDLITINNTTKEPVQLWTVHIFASNPQNTFTLSLMEPPSANSNSNGDSDEGFLESFXLEDRMLQPGEILKXWLSCKTKEMGMYQSIVHFDVGEERIERVVFVLVEDKISKSLASKRPYSRQRRKDKFAVDNFVAGSRPAGKTNRAYINRLPKYDIPGDIRHLLESNQIPEAVEGGLTRKNYASFFKTLVIMEEIQLEEDMRTYDMECVTMRKRPNQFLSMLVPGLAERRPSLVHGDFIFAKLASENDKNTGRPYQGFIHRVEADEIFLKFDNEFHLRHRDGNLYDVHFTYNRINMRRLYQAVEAASGLGSEFLFPSTLARKRFIETTDLIPISGXFNDEQISSIKSIXGCKGAPPYLIYGPPGTGKTKTIVEAVLQLYKHNKDARILVCAPSNSAADHILEKLLAEKSVEFQENEIFRLNASTRPYEDVKPEIIRFCFFDELIFKCPPVSALRHYRIIISTYMSACLLYAEDVSRGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVIYSKKADTHGLGTSYLARLFQCEMYATGDANYATTLVNNYRCHPEILHLPSKLFYNGALIACRDKTTFMVSPGFLPNEEFPXLFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAGGNIMEEHIGIIAPYRQQVLKIKQTLENQEMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNHRRFNVAVTRAISLLVIIGNPHIICKDNYWSQMLWHCVDNKSYQGCKLPDRPKTYVEDAGDNNVKPYGEVNGEDSVEWGQDLSQVEIPKPVTDEAEWSDGWRSS* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2211 883 PANTHER DNA2/NAM7 HELICASE FAMILY 8 837 IPR045055 -
Amo05g2211 883 Gene3D - 331 613 IPR027417 -
Amo05g2211 883 CDD DEXXQc_Helz-like 403 627 - -
Amo05g2211 883 Pfam AAA domain 517 590 IPR041677 GO:0004386
Amo05g2211 883 Pfam AAA domain 402 497 IPR041677 GO:0004386
Amo05g2211 883 MobiDBLite consensus disorder prediction 836 862 - -
Amo05g2211 883 Pfam AAA domain 599 800 IPR041679 -
Amo05g2211 883 CDD SF1_C_Upf1 628 816 IPR041679 -
Amo05g2211 883 PANTHER RNA HELICASE SDE3-RELATED 8 837 - -
Amo05g2211 883 Gene3D - 627 828 IPR027417 -
Amo05g2211 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 812 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2211 Amo-Chr5 47665237 47669963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2211 402 558 Core DNA Replication Machinery Family AT1G08840 29.814 9.06e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2211 K18422 - gmx:100801796 1390.94