Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2178 ATGGAAAACTACAACAATCCAGCAGGAATTTGTGTGCGTCCATTTAAGGTATCTGATGCAGATGACTTGCTTACATGGGGGCGCGATGATACAGTCACGCGCTTCTTGAGATGGAACTCCATCAAATCCAAACAAGAGGCAATCGATTACATAGAGAAGGTTGCTATGCCTCATCCATGGCGCCGATCTATATGCCTCCATGACCGCTCCATTGGATACGTTTCAGTGAGGCCCGGATCGGGTGATTACCGGTGCAAGGCGCACGTGAGCTACGCGGTGGCGCTGCAGCACTGGGGGAAAGGGATAGCCACGGCCGCTCTGAGGATGGCCATACCGGAAGCTTTGAAGGAGTTTCCGGAGGTGGTGAGATTGGAGGCGTTGGTGGAGGTTGAAAATGAGGCCTCTCAAAGGGTTCTCCACAAAGTTGGCTTTCACAAAGAAGCCTTGCTACGTAAATATGCCTTCTGTAAAGGGCACATCAGGGATTTCCTTATGTATAGCTTCTTTCCTACTTGA 516 0.5039 MENYNNPAGICVRPFKVSDADDLLTWGRDDTVTRFLRWNSIKSKQEAIDYIEKVAMPHPWRRSICLHDRSIGYVSVRPGSGDYRCKAHVSYAVALQHWGKGIATAALRMAIPEALKEFPEVVRLEALVEVENEASQRVLHKVGFHKEALLRKYAFCKGHIRDFLMYSFFPT* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2178 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 169 - -
Amo05g2178 171 Pfam Acetyltransferase (GNAT) domain 11 145 IPR000182 GO:0016407
Amo05g2178 171 Gene3D - 4 168 - -
Amo05g2178 171 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 168 IPR016181 -
Amo05g2178 171 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 170 IPR000182 GO:0016407
Amo05g2178 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2178 Amo-Chr5 47282062 47285365 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo05g2178 Acetyltransf_3 1.1e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2178 - - gmx:100809953 243.047