Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2167 ATGTTGATGAGTAAGCACAAACCTTCATTCAAGATATGGGATGTTTTATCAAATGAAGAGGTTGTGGACATAGTGGCATCTTCTCCACGCCCTTCTGCGGCTCGATCACTGGTGGAGTCAGCTGTTAAAGTATGGAGGATGAAGTTCCCTTTGTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCGTTGATTCAAATTTGGACTCGGGTTTGGCATCGACCGCAGATGACTCAACACTAGAGCCACCAATTGACCAATCCGAGCAGTCTTTTCTCCTTAGCGAGAAGGGAACTCGCATGGATGCTGAAGAACAGCAACAATAG 327 0.4618 MLMSKHKPSFKIWDVLSNEEVVDIVASSPRPSAARSLVESAVKVWRMKFPLCKVDDCAAVCLFVDSNLDSGLASTADDSTLEPPIDQSEQSFLLSEKGTRMDAEEQQQ* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2167 108 MobiDBLite consensus disorder prediction 74 95 - -
Amo05g2167 108 MobiDBLite consensus disorder prediction 74 108 - -
Amo05g2167 108 Gene3D - 11 71 IPR036457 -
Amo05g2167 108 PANTHER ALPHABET, ISOFORM E-RELATED 12 76 - -
Amo05g2167 108 SUPERFAMILY PP2C-like 12 65 IPR036457 -
Amo05g2167 108 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 12 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2167 Amo-Chr5 47031973 47032705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2167 12 71 PP2C-type Phosphatase Gene Family AT1G16220 57.377 7.30e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2167 - - gmx:100802479 121.709