Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2154 ATGGCTTCTACTTCCATAGCCGGGGTTGATGACAAAGAGCTTACCATTCATATCCCAGACCTTGTGAAGGTTTTCAAGGACGGCTCCATTGAGCGCCTCCAAAACTCTCCACTTGTTCCACCTTCGACTCTTGGATCGGTTTCTTCCAAAGACGTTGTCATCTCCAACAACCCCTCCATTTTCGCACGTCTATACCTTCCAACAAAGTTCATCCACCACCACGACGCCCACAAAGTCCCCATCTTGGTGTACTTCCACGGCGGAGGCTTCTTCTTTGAATCTGCCTTCAACGAGCGCCACCACAACTACTTCAACTTGTTCCTCTCCAAAGCAGAAGCAGACATCTTAGTTGTCTCTGTTGAATACAGGCTGGCACCGGAGATCCCTCTCCCTGCAGCATATCATGATTGCTGGCAAGCACTCAAATGGGTGGCTTCCAACGACTCTGATCCATGGATCCTCAACCATGGCGATTTCCAGAGATTGTTCCTCGGTGGCGACAGCGCCGGTGCTAACCTTGTTCACAACGTTGCTTTGCGTGCAGGTGCTGAGGCTCTACCTAACGCGGTCAAAGTGTTGGGTGCTTTTCTCTCTCAGCCATACTTCTTGAGCACAAAACCCATCGGATCTGAAGTAGTGGAAGGGCACGAGGAGAGTCCACCGTATGTGGTGTGGGGTTTGGTGTATCCGAATGCGCCCGGCGGGGTGGATAACCCACTGATCAATCCCTTGGCCCCTGAGGCTCCCAGCTTGGCTACTCTTGGGTGCTCCAAGATCATAGTTTGCGTTGCTGAAAAGGATTCAATAAGGGACAGAGGAGTTTGGTACTATCAAGCTGTTAAGAACAGTGGGTGGCATGGTCACGTGGAACTCTACGAAGCTGAACACGAGGACCATGCTTTCAACATTCACACTCCCGAATCCGAAAATGCTTTGAAACTCATGAAACGCTTGGGTCACTTTATCCTTCACTGA 975 0.5067 MASTSIAGVDDKELTIHIPDLVKVFKDGSIERLQNSPLVPPSTLGSVSSKDVVISNNPSIFARLYLPTKFIHHHDAHKVPILVYFHGGGFFFESAFNERHHNYFNLFLSKAEADILVVSVEYRLAPEIPLPAAYHDCWQALKWVASNDSDPWILNHGDFQRLFLGGDSAGANLVHNVALRAGAEALPNAVKVLGAFLSQPYFLSTKPIGSEVVEGHEESPPYVVWGLVYPNAPGGVDNPLINPLAPEAPSLATLGCSKIIVCVAEKDSIRDRGVWYYQAVKNSGWHGHVELYEAEHEDHAFNIHTPESENALKLMKRLGHFILH* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2154 324 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 11 323 - -
Amo05g2154 324 SUPERFAMILY alpha/beta-Hydrolases 22 322 IPR029058 -
Amo05g2154 324 Pfam alpha/beta hydrolase fold 82 301 IPR013094 GO:0016787
Amo05g2154 324 Gene3D alpha/beta hydrolase 19 323 IPR029058 -
Amo05g2154 324 PANTHER ARYLACETAMIDE DEACETYLASE 11 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2154 Amo-Chr5 46847981 46849273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2154 11 322 Carbohydrate Esterase AT3G48690 40.741 2.82e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2154 - K13258 gmx:100813532 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2154 05 46847981 46849273 Amo15g0168 15 6501033 6502290 hybridization
Amo05g2154 05 46847981 46849273 Amo19g4303 19 159743397 159744440 PCT
Amo19g4304 19 159745018 159746010 Amo05g2154 05 46847981 46849273 PCT