Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2145 ATGTTGGTGGAGAGATCGGATGATTTTGGATCTAGATACTTAGCACCCTTGTTCTTTTTCAGTGGTGGCTTGAGGTGCAATGTAGTTAAGGTTTTGCAGACTGTAGATTTGGGTTTTGTTGTTATAGTGATCTTGTCTATCCTCACAAAGATTGTTACAACATTTGCAGTTACTCGCTACTATGGTATGCCTTTCAGAGAGAGTTTGGCTTTTGGGTTGCTTATGAACACCAAAGGCGTCTTGTCACTCATAGTGCTCAACATTGCATGGGATAATAAGCTTATAAGTGCATACGCATTCTCAATCATGACGCTTACTATTCTGATAATGACTTTCATGGTGTCTCCAATAATCAACGTCATTTACAGGCCAAAAACAGCCTATAGGATGAACATGCTAAGGACCATACAAAACCTAGGGTTTCAAACAGAATGGAATGGTGAATATCCTAGAGGCCTTAAGTGGCATCAGTGTCTACTCTTTGCAAGTGACAGCAGTTCAACTCGTTGA 510 0.4039 MLVERSDDFGSRYLAPLFFFSGGLRCNVVKVLQTVDLGFVVIVILSILTKIVTTFAVTRYYGMPFRESLAFGLLMNTKGVLSLIVLNIAWDNKLISAYAFSIMTLTILIMTFMVSPIINVIYRPKTAYRMNMLRTIQNLGFQTEWNGEYPRGLKWHQCLLFASDSSSTR* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2145 169 Gene3D - 1 130 IPR038770 -
Amo05g2145 169 Pfam Sodium/hydrogen exchanger family 2 118 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo05g2145 169 PANTHER CATION/H + ANTIPORTER 1 141 - -
Amo05g2145 169 PANTHER CATION/H+ EXCHANGER 3 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2145 Amo-Chr5 46715089 46716510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2145 1 144 Antiporter Super Family AT1G05580 39.310 2.48e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2145 - - ahf:114927762 280.796