Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2144 ATGAACTTAGATTTTGTTTTAAGAGCACCTAAGAAGCCCACAATAATTGCAATTTGCAGCCCTCTGATTCCAATGATATTGGGAACTGGAATTTATTCTTTGGTAATAATAGTGGACAAGAAATTCTTAAAAAATTATGTTGAAACATACGAGTTCCCTGTTCGTGCAAACATTCTTGTGGACCTTAAACTTCTCTACACTAGGCTTGGAAAATTGGCATTAAAAGTAGCAACACACAATGACTTCTATAATTGGATTATGTTTGCATTGGTGTTTCCATTTCTTGTTAATGGTTATAGAGCAATTTTCTCAATACTGTGTGTCATAGCTTTTATTCTCTTAAGCCACTTTGTGTTGCGCCCTTTGCTAGAAAAGATAGTGGCCAAGAAACCAAACAAGCATGATTGGACCAATTACCAGTTGTCATTTGTGATCATGGGGCTTTTCGCTTGCACGGGGCTTACCAATGTCCTCGGTGTGAATCCCCTTGTCGGGGCGTTGATTTACGGACTTGCCATTCCATGA 525 0.3867 MNLDFVLRAPKKPTIIAICSPLIPMILGTGIYSLVIIVDKKFLKNYVETYEFPVRANILVDLKLLYTRLGKLALKVATHNDFYNWIMFALVFPFLVNGYRAIFSILCVIAFILLSHFVLRPLLEKIVAKKPNKHDWTNYQLSFVIMGLFACTGLTNVLGVNPLVGALIYGLAIP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2144 174 Pfam Sodium/hydrogen exchanger family 11 173 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo05g2144 174 Gene3D - 1 174 IPR038770 -
Amo05g2144 174 PANTHER CATION/H+ EXCHANGER 3 1 174 - -
Amo05g2144 174 PANTHER CATION/H + ANTIPORTER 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2144 Amo-Chr5 46714496 46715073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2144 1 174 Antiporter Super Family AT1G05580 31.016 2.91e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2144 - - adu:107472961 323.168