Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2135 ATGGCTACGCTACAAACCGTTGTTACTGTCATCCTTCTCCTTATGCTTCTTCTCATCCTCATCTTCCTTTTTTATCTCTTCAAACCATGGCGTTTCTTCTTCCGCTCCCCTTCCCGCTCTTCCCTCAAGGTCGCTGTTGGTGAGCTAGAGAGACCTCTCGTTCGCGAAGAAGGTGATGCCAACGATGCCAATTTGCCCTTCAATAATAATAGCAATAATCAGAACAATGAATTGGCCAGAGATTATGATCTCGAAGGTGCTTGTCACCCCAACGAAGTTCATTTTCGCTCTCCTCGATCACTTGGCCTTGTACGCAAGCCGAGGCTTCCGATTCGCAATGCGCCACAGCAAGGGGATGCTTTGGTTTTAGATGTTATGTCTGCAGACTCTGTTGATGTTGGCCAAACCCTCAGGCTTTCTCCTGCTCTCTTAGCTGAAGCACAAAAGCATCACCATCAGCATCAGCATCTCCAGAATAATAGGGTTCTGGACTCTCTGGAGAGAGATATCCTTGGTCAAAGAAGTTGCCTTACTCTGGAGGTTATCAGTGGTCCTTCCCGGGGGATTCGATGTTCTGTACAGTCTATGAATTCTGCTGGTCTGCCCCTCACCCTGGGAAGAGTTCCTCCAAGCGATTTGGTGATAAAGGATTCAGAGGTTTCGGGAAAGCATGCCATGATAAATTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGCTTAAATGGAACACTCTTGAATTCTAGGCCAATCAACCATCCAGACACTGGAAGCAGGCTTTGGGGAGATCCAGTGAATCTTGCTGATGGCGATATCATAACACTTGGAACAACATCGAACATAAGTGTTCATGTTGCTGCACAAAATCAGCAACGCATTCCATTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTAGAGGAGCAAAACAGCTTGCTATGGAAGATGTTTGCTATTATCAGTGGCCTCTGCCTGGGCTGGATCAGTTTGGGCTATTTGGTATCTGCGATGGACATGGTGGAGATGGGGCTGCTAAATCCGCAAGCAAACTTTTTCCTGAGATAATTGCTAATATATTATTGGATTCATCAAAAAGGGAGCGGATTTTATCACTTCATGATGCTTCAGAAATTCTAAGAGATGCATTTTCTCAAACAGAAGCATGCTTGAATCATTACTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAGTGTAAATGGGGAACAAATCAAGATGTCGGAAGATCACAAGATAACAACTTATTCTGAAAGACAGAGAATTGAAGAGACTGGTGAACCATTGAAAGATGGAGAAACACGTTTATATGGGATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGCTCAGAGCCTTATATTAGTCAAGTTGTGCATATTGATCAAGCAAGCAGGGCTTTTGCCGTTCTAGCTAGTGACGGGCTTTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTGTACAGAGAGAGAGAATTTAGCAGAAAAGATTGCTAGTTCATTGTTGGCTGAGGCTAAGACACTCAGAACAAAGGACAATACCTCTGTAATTTTCTTAGATTTTGATAGCTTCAATAGATTTTCTTGTAAAGTTGAATCCTAG 1749 0.4391 MATLQTVVTVILLLMLLLILIFLFYLFKPWRFFFRSPSRSSLKVAVGELERPLVREEGDANDANLPFNNNSNNQNNELARDYDLEGACHPNEVHFRSPRSLGLVRKPRLPIRNAPQQGDALVLDVMSADSVDVGQTLRLSPALLAEAQKHHHQHQHLQNNRVLDSLERDILGQRSCLTLEVISGPSRGIRCSVQSMNSAGLPLTLGRVPPSDLVIKDSEVSGKHAMINWNLDKMKWELVDMGSLNGTLLNSRPINHPDTGSRLWGDPVNLADGDIITLGTTSNISVHVAAQNQQRIPFGVGMASDPMALRRGAKQLAMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIANILLDSSKRERILSLHDASEILRDAFSQTEACLNHYYEGCTATVLLVWADGENFFAQCANVGDSACVMSVNGEQIKMSEDHKITTYSERQRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAVLASDGLWDVISMKKAIQLVLQMREKYCTERENLAEKIASSLLAEAKTLRTKDNTSVIFLDFDSFNRFSCKVES* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2135 582 CDD FHA 177 288 IPR000253 GO:0005515
Amo05g2135 582 SMART PP2C_4 293 568 IPR001932 -
Amo05g2135 582 ProSiteProfiles PPM-type phosphatase domain profile. 299 570 IPR001932 -
Amo05g2135 582 PANTHER PROTEIN PHOSPHATASE 2C 70 36 581 - -
Amo05g2135 582 Gene3D - 308 578 IPR036457 -
Amo05g2135 582 Pfam FHA domain 204 279 IPR000253 GO:0005515
Amo05g2135 582 ProSiteProfiles Forkhead-associated (FHA) domain profile. 203 254 IPR000253 GO:0005515
Amo05g2135 582 CDD PP2Cc 311 570 IPR001932 -
Amo05g2135 582 ProSitePatterns PPM-type phosphatase domain signature. 336 344 IPR000222 GO:0043169
Amo05g2135 582 Gene3D - 172 307 - -
Amo05g2135 582 SUPERFAMILY SMAD/FHA domain 176 282 IPR008984 GO:0005515
Amo05g2135 582 PANTHER PROTEIN PHOSPHATASE 2C 36 581 IPR015655 GO:0004722|GO:0006470
Amo05g2135 582 SUPERFAMILY PP2C-like 310 572 IPR036457 -
Amo05g2135 582 Pfam Protein phosphatase 2C 317 563 IPR001932 -
Amo05g2135 582 SMART FHA_2 202 254 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2135 Amo-Chr5 46607277 46611208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2135 25 572 PP2C-type Phosphatase Gene Family AT5G19280 55.556 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2135 K01090 - gmx:100170642 801.201