Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2121 ATGGCGAATGGTATCACGCACGAGCCTTCTCCTTCCATGCTCGTCCGCTGGTTTAACGCCTTACTTCCCCAGTGCCAAGGCTACCTCAAAGCCGAAGAAATTGTTTGGACGTATGGGCTATTGTTGTCAGAACTCACCTCCAATAGGAAACACGCCAAGGGCATCACGGATGCCATTTGCAACTGGATTTTTGAGATTTACTGTGAGGCATACAGGCAGGTCCAGCCTAATCTGCATTCTGCTCTGCAATGTCTCTTTGGTACCTGGTCAAAGATCTTCCCTCCCTCTGTCCTAAGCAATATTGAAGCTCAATTGCAATCTTCACTAGCAGTTAATAATCAACAATCATTTGCTAATCACCTTGGGCTATATGATTTTCGTGGACTGATTCTTGGGGCACATGTTATTAAACCACAATCCTTGCAGCAGATGGAACACTCTAGTTCAATTATGGATAATGTTGGTGGTGATAAGTTGGATTCAACAAAAACTGTAGTGATGGTTGGAACATATTTCAAAATTCCAAGACTTATAATCTCAAATGATGAACAACAACGCCAAAGTCCAAGAGCTCTTATTGAGGCATATGGTTGTGACAAAAGCCATGAAATTCCTAGTACTAAGCTTTTGTTGGTGGAGCAGCCTGGCAGAAATGGTTTAGGGAGCAAGTTTCCATTGGCATCATGGCAGGACACTGAAGAAGAGGAGTTTGATTGGAAAGATATGAATCCAGGATTAGTAGACTGTAATACAAACAGCAGTTCTATGCAATCAAGTGTTAGATTCTCCAAGAAAAGAAAGTTATCTAATGATCTATCTAATTCTTCACAGTACCCCTTTAATATGGGGGATGCTCTCCCTGCTGTCAATGCTCATGCTACTTGTCCTTCCGGCTTGAATCCATCATTTCCATTGCAGAAACATCCTAGGAGTCTGTTTGAACCAATAAACGTTAATAATAACACCAATGTGGGTCATGGTCCCAATAGAACTTTGTTTATACATGACCAGTTGCCTAATCAATCTGGACCAATTTCCTCTAACATGCAAAATCATGGACAAGCACCTCAACTACAGTTTCTTCCACCTAAAGTTCCATCTTCAACACAAATTAATCATGGGAGCTCTTTGCAAGGACATGGTGCCTCAATAAGTACGCCCATCTCAAATCCATTACCTGATATGCAGGGCCAAAGTTTACATTTACATGAGGGAACCTTGCCACCTTTACATCCAAGCCTCCCAACTGCTCCATCACAAATGATGTCTCATCCCCATGCCAATGCTTCAGTAACAAGTCAACCACCACCTGCATATCTTAATTTGATTAGTTCACTAGTGAACCACGATGTGATCTCGGTAACTAATCCTCCCACCAATCCACCCACTGGACTGGATTCCATTAGGACAGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACGGTGATCTTCCTAGACAATGCATGAGTTGTGGTCTCCGATTCAAAAGGCAAGATGAGCACAGTAAATATATGGATTGGCACGTGACTAGGAACCGAATGTCGAAAAGCCGGAAACAGAAGGGGTCTCAAAAGTGGTTTGCAAGTGGGAGCATGTGGCTAAGTGGTGCAGAGGCTTCGGAAAAGGAATCGATTCCAGGGTCATTGCCTCCCGAGGATACAGAGGAAATGAAATATGAGGAAGAGTTAGGCGTTCCTGTAGAAGAGGATCAGAGTCGATGTGCACTGTGTGGAGAGGGCTTCGATGAGTTTTACAGCCACAAAATGGATGAGTGGATGTATAGAGGAGCCACATACCTTAAGGCACCATGGGAACAACATTGGCCCCCATAG 1857 0.4351 MANGITHEPSPSMLVRWFNALLPQCQGYLKAEEIVWTYGLLLSELTSNRKHAKGITDAICNWIFEIYCEAYRQVQPNLHSALQCLFGTWSKIFPPSVLSNIEAQLQSSLAVNNQQSFANHLGLYDFRGLILGAHVIKPQSLQQMEHSSSIMDNVGGDKLDSTKTVVMVGTYFKIPRLIISNDEQQRQSPRALIEAYGCDKSHEIPSTKLLLVEQPGRNGLGSKFPLASWQDTEEEEFDWKDMNPGLVDCNTNSSSMQSSVRFSKKRKLSNDLSNSSQYPFNMGDALPAVNAHATCPSGLNPSFPLQKHPRSLFEPINVNNNTNVGHGPNRTLFIHDQLPNQSGPISSNMQNHGQAPQLQFLPPKVPSSTQINHGSSLQGHGASISTPISNPLPDMQGQSLHLHEGTLPPLHPSLPTAPSQMMSHPHANASVTSQPPPAYLNLISSLVNHDVISVTNPPTNPPTGLDSIRTEFDPDILKVRHEGVISALYGDLPRQCMSCGLRFKRQDEHSKYMDWHVTRNRMSKSRKQKGSQKWFASGSMWLSGAEASEKESIPGSLPPEDTEEMKYEEELGVPVEEDQSRCALCGEGFDEFYSHKMDEWMYRGATYLKAPWEQHWPP* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2121 618 MobiDBLite consensus disorder prediction 416 433 - -
Amo05g2121 618 Gene3D - 46 112 IPR008942 -
Amo05g2121 618 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 65 612 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Amo05g2121 618 MobiDBLite consensus disorder prediction 340 396 - -
Amo05g2121 618 MobiDBLite consensus disorder prediction 340 433 - -
Amo05g2121 618 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 65 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2121 Amo-Chr5 46378525 46393228 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2121 395 613 C2H2 Transcription Factor Family AT4G04885 51.965 2.31e-64 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2121 K14400 - aip:107640327 551.592