Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2115 GAGGCTCAACTGCTTATTCAACCGGGACCTAAACCCGAAGAAGTTGAAGCTCAAGGTCCCAACAAGACTACTACACCGCCGGCTGCAGAGGGCGAAGCGGCTTTTCCTCCAGAAGCAGACAACTGCAATGGGATCTTTATCTCCTATGACCTGCTTGGCAGGAGGAAGGAGTACCCTAAACTGAAGAACGCCACAGCGCAGCCGTGGGCCTTCAATGCCACCGCAACGGTGCTCAACACGGGCACCCAAGTGGTCAAGGGTTGGAAGCTCTACGTTGGGTTCCAACACGATGAGATTCTCGTCTCTGCCTCGGGGGCATACCTCTTCGAAGCGGCTGATTTCCCTGCTTATGTGGGACATGGCACCTACTTGGTTGGAGCTGGTCTCCCTGATCTCCAAACCGCCATCAACACTGCCCAAGATTTGAACCAAATTCAAGCTGTGCTTAATCTTGCTGGCACCCAGTTCGGTGTTAAGCCCCCTGCCATTCCAATGCCTAGAACCATCAAATTGGTCATTGATGGATACACATGCCCCCAACCAACTCTAAAACGTCAGTCCTCCTCCCACCCTTTAACTAATTATACTCCATTCTCATTTCAGTTCTTAATGAAACCAATAAATGAAATGGTGCTGTATGTGACAGAGAGTTCCATGTATGCATGCTGCAAAAGAGATCCAAAATCGAAGGCTGATACGTCGAACAAGAAATACCAAGCAACGCAGAAAGGGGATCTTTCCATAATGTACGACGTTGTGCAAGTATACTCAAACAACTACATGGCTCAGGTGACGATGGAGAACCGCAACCCACTGGGGCGCCTAGACCGTTGGAACCTGACATGGGAATGGACGAGAGGTGAGTTCATATACAACATCAGAGGCGCCTTCACGCGCGAGATTGACGCCTCTGACTGCGTCTACGGCCCCGCCGGAGAATACTACGCAGACATGGACTTCTCCAAAGTAATGAACTGCCAAAAGAATCCGGTGATCAGCGACTTGCCCCCTGAAAAGTTGGGTGACAACGAAATAGGTAACATCCCTTTCTGCTGCAGAAATGGCTCAATCTTGTCTCCTCTGATGGACAAAAACCAAGTGAAGTCAGTTTTCATGATGCAAGTGTTCAAGATCCCACCCGATCTCACCAAGACTTCCATCTACCCTCCGGAGAAATGGAAAGTTTCGGGAGTCCTGAATCCCGATTACAAATGCAGCCCTCCGCTGAAAGTGGAACCTTCTAGATCCCCGGACCCCAGGGGAATCGGGGCGACGGTTATCGCCCTTGCAAGCTGGCAAGTCGTGTGCAACATCACAACGCCAACCAAGAGACACAACCGCTGCTGCGTGTCTTTCTCTGCATTCTACAATGATTCTGCTGTTCCCTGCAACACTTGCGCCTGCGGTTGTCCCAAACCAGCGGGCCATTGTAACCCTTACGCAAGGGCACTACTTCTCCCCCACGAGGCTCTTCTTGTGCCCTTCTACAACAGAACACGCAAGTCGATTGCGTGGGCCAAGTTGAAGCATTTTCCCTTGCCAACCAAGCTGCCCTGCCCCGACAACTGCGGCGTTAGCATCAACTGGCATATTCTTTCTGACTTCAAGGGTGGCTGGACAGCCAGGATCACTATCTTCAACTGGGAGACATTCAACTTCCCCGACTGGTTCATGGCGTTGCAGTTCAAGAACCCTTCTCTTAGTCTTCAGGATGTGTATTCCTTCAACGCCACCTTCCTCCCGCGGCTCAACCACACCATATTCATGCACGGCCCACCGGGCTTAACCTATTTGGTATCTCTCGACAATGACACAAATCCCAAGGTGCCTGGTAAGCAACAGTCGGTTATATCCTTTAGCAAGAAGAATACGCCCCATATCAAAATCGCCAAAGGCGATGGCTTCCCTTCTAGAGTTTATTTCAATGGAGAAGAGTGTTCCCTTCCTACCCAATTTCCTCTGCGTAGTTCAAATCACCATACTCCTCTTGTACATCTATTAAACCATATCTTAGTCTTAGTTTTAGCTCTTACAATCAACAGTCAAATATTGCATTAA 2058 0.4981 EAQLLIQPGPKPEEVEAQGPNKTTTPPAAEGEAAFPPEADNCNGIFISYDLLGRRKEYPKLKNATAQPWAFNATATVLNTGTQVVKGWKLYVGFQHDEILVSASGAYLFEAADFPAYVGHGTYLVGAGLPDLQTAINTAQDLNQIQAVLNLAGTQFGVKPPAIPMPRTIKLVIDGYTCPQPTLKRQSSSHPLTNYTPFSFQFLMKPINEMVLYVTESSMYACCKRDPKSKADTSNKKYQATQKGDLSIMYDVVQVYSNNYMAQVTMENRNPLGRLDRWNLTWEWTRGEFIYNIRGAFTREIDASDCVYGPAGEYYADMDFSKVMNCQKNPVISDLPPEKLGDNEIGNIPFCCRNGSILSPLMDKNQVKSVFMMQVFKIPPDLTKTSIYPPEKWKVSGVLNPDYKCSPPLKVEPSRSPDPRGIGATVIALASWQVVCNITTPTKRHNRCCVSFSAFYNDSAVPCNTCACGCPKPAGHCNPYARALLLPHEALLVPFYNRTRKSIAWAKLKHFPLPTKLPCPDNCGVSINWHILSDFKGGWTARITIFNWETFNFPDWFMALQFKNPSLSLQDVYSFNATFLPRLNHTIFMHGPPGLTYLVSLDNDTNPKVPGKQQSVISFSKKNTPHIKIAKGDGFPSRVYFNGEECSLPTQFPLRSSNHHTPLVHLLNHILVLVLALTINSQILH* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2115 685 PANTHER COBRA-LIKE PROTEIN 7 215 679 - -
Amo05g2115 685 PANTHER COBRA-LIKE PROTEIN 7 31 187 - -
Amo05g2115 685 PANTHER COBRA-LIKE PROTEIN 7 215 679 - -
Amo05g2115 685 MobiDBLite consensus disorder prediction 1 26 - -
Amo05g2115 685 Pfam COBRA-like protein 260 439 IPR006918 GO:0010215|GO:0031225
Amo05g2115 685 PANTHER COBRA-LIKE PROTEIN 7 31 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2115 Amo-Chr5 46270778 46273071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2115 36 679 COBRA Gene Family AT3G20580 51.846 0.0 689