Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2094 ATGATTCCGAAATACATTGAATTAGTGATTCTTGTTTCCTCTCTTTGTCTAGTTTCACAAGTTTGCTATGCCGACCCTCCTTTTGAGATTTGCTCCAGCCATGAAAATGGGAGAACCTTCCAGAACAATCTAAACAACCTTCTCCAATCCCTACCGTCCAATGCATCAGCCTCTAAGTTCTATAACACATCATATGGGAACGCCACAGAAAGAGTGTATGGGCTCTACATGTGCCTTGACTTCATCTCAAGCAAAGCTTGCCAGAACTGCATAGCCACCGCAATAGAGGACATCCTCAAACTCTGTCCCCAATCACAAGAAGCTGTTCTTTGGGAGGAGAGCTGTCAGATGCGTTATTCCAATACCAACTTCATCGGCACGCTGAATGACACAGGGAACATAGGCAAAGACAATGTTCAAAATGTGTCAGAACCACACAAATTTCAGTCTTCTGTGAACCAGATGCTGAGTAATCTTTCGGCCACCGCAGCTTTTAATGTTTCGGCAAACATGTATGCCACCGGAGAAGCTCCCTTTGGAGATGAAACAATATATGCCTTAGTGCAGTGCACAAGAGATTTATCAGCCAATGATTGCAGCAAGTGCCTCAAAAGTGCTATGAAAGACATACCAAGCTGTTGCTATGGCTCCATCGGTGCCAGAGTCCTGAGCCGCAGTTGTTACCTCAGATATGAATTTTATCCCTTCTATCTTGGTGCCACAGGGCCCTTAAGTCCTTCACCCCGCACAAATCAAGGCAAAAATAGTTCAAGGTCGAGCAAAGTATGGATTATTACGGGAATTGCGGTTGCACTTTTTACACGGAACAAGAAAACACACAAGCGGGATGAAGCAGTGTTCCATCATCCAGATTTTCCACGATTACATGGCGTAATATCCGAGGACTCCCCTTATATTGATTTTGGATCACTTTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAACTTGGACAAGGTGGCTTTGGTCCAGTTTACAAGGGGATTCTAAGCAATGAGCAGGAGGTAGCAATCAAGAGGCTCTCAACCTGTTCTGAACAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTCATAATGAAGCTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGGGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAACGGTAGCCTTGATGTACTCCTTTTCGATCCTAACGAACGTGCAAAGCTAGTTTGGACGAAATGCCTTGATATAATAGATGGATTAGCAAGGGGGATTCTTTATCTTCACGAAGACTCTCGACTTAAAATTATTCATAGAGACCTAAAAGCAAGCAATGTGTTGTTGGACTCAGATATGAATCCAAAGATCTCGGACTTTGGAATGGCAAAAATATTCGCAGGGAATGAAGGCGAAGCTAACACAGCTACAATAGTTGGCACATATGGATATATGGCACCGGAGTATGCTATGGAGGGACTATATTCCATAAAATCTGATGTTTTTGCATSTGGAGTACTAGTTCTKGAGATCATTACAGGGAAGCATAAYGCAGRCTTCTTCCACTCTAAAAGTACTCCTAGTCTTCTAACATATGCATGGCATCTATGGAATGAGGGGAAGGGACTAGAGTTAAAGGATCCCTTGTTAGGTGATTCATGCCAAGAAGATGAGTTCTTGAGATGCATGAATATTGGACTGCTGTGTGTTCAAGAAGATGCATATGATAGGCCAAGCATGTCTTCTGTTGTTCTAATATTGAAGAATGAATCAGCAATGGTTGGCCAACCAGCGCGACCACCTTTCTCAGTAGGGAAATTCAATGACAATGATGGGCTGCACCCACACTCCAAACAATGCTCTATCACTTTCTTAACTGATTCTGACATATTATTGCCTCACCCTATTGACACATATTGTCCAACTGAATTCCCATTATATAGCAGCAACAGCACATTTGACAATAACCTGAAGCTTCTTTTGGGGTTGCTGCCCTCCAACACGGCTTCCAAGAATGGCTTCTACAACACATCCGTGGGAGATGGGCAAGACAAGGTGTACGGACAAGCACTGTGCAGAGGAGACATCACCAACTCCACAGTCTGCAAGGAATGCATTCAGAAAGCAAGCCAAGATTTAACAAAGATGTGCAACAGTGAAGATGCAATCATATGGTATGAGCTTTGCCAAGTCCGCTACTCCTTTCAGATGTTCTTCACGAGTATGACTTACACCGGGAAGTATCCTAACCATAATCTTAAGGAGAAGAATATCTCGCACACTTCTGGATTTGACCAAGTCTTGGCATATCTGATGAACAATCTCTCACAAGAAGCAGCTTTTATTCCTGCCAACAACATGTTTGCAGCAGGGGAGATTCAATATTCTGGTTCTGATGGTATCAAGAACAAGAAGCTTTATGGACTAGTCCAGTGTACCAGGGATATCTCTGAAGGAGACTGTGCCACTTGCTTGAGTTCTGCCTTAACAGAACTTACTCAATGCTGCTCCTTCCGAGAAGGCGGTATCATTCTTAGTCGGACTTGCAATGTGAGGTTTGAATCATACAGGTTCTTCAACCAGTCATCAGCAAAGATGCTGCTCTTTCCAACTTCCAAAGGAGGGGGGAAATGGAAGCCATGGATGTTTGCATTGACAATTGTTGGTTCACTCTTAGTATTAGCAGTTACTATTTTGCTGTGCACTGCTTGTCTGCTCCGCAAAGGGGACACAGGGAGAGATGAAGAAAGGATCGAAAGGACGCTGCTACAACAGTTGGCAACCTCCAAGAGCGTAGCAGTTACACAGGAAGGTGACCTGATTAGCTCTGATGAACTGTTGTTCATGAACTTAGCAACCATTAAGGATGCCACTGATGACTTCTCTGATACAAATAAACTGGGACAAGGAGGATTTGGTGCAGTGTACAAGGGTGTTCTACCAGATGGCAGTGAAGTTGCGGTTAAAAGGCTTTCAAAAAAGTCTTGGCAAGGGATAGAGGAATTGAAAAATGAGGTCATACTCATTGCCAAGCTTCAGCATAAGAATCTAGTGAGGCTGTTGGGGTGTGGCTTAGAGGGGGATGAAAAATTTCTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGATCCAGAGAAACGTTCCGAGTTTGATTGGCATACTTGGTATGGGATTATCAATGGCATTGCGAGAGGACTGCTTTATCTTCATGAGGAGTCTCGGCTTAAAATCATTCACAGGGATTTAAAGCCAAACAATGTGTTGTTGGATCATGAAATGGTTGCCAAAATATCAGATTTTGGTATGGCTAGGATATTTTTCGAGAATCAAAATACAGCAAACACAAAGAGAGTTGTGGGAACATATGGATATATGGCTCCCGAATATGCAATGGAAGGACTCTTCTCAGTAAAATCGGATGTGTTCAGCTTTGGTGTCATGCTGCTTGAAATAATCAACGGGAAAAGAAACAGTGGGTTCTACACAACAGAACTTGCCCCAACACTACTGGCATATGCATGGCAGCTGTGGAATGAAGAGAGGAAGTTGGAATTTGTGGATCCAGTGTTGTTGGAATCGTGTATGGCCTGTGAAGTTGTGAAGTGCATGCACATTGGGCTTCTGTGTGTGCAGGAAGATCCGGAGCTGAGGCCTAACATGTCAAGCGTGGTGGTTCTCCTAGGAAGTGAACAAATGGCTCTTCCAAAACCAAGTCAACCAGTATTTTCATTGGGTAGGGCGTTTCATGTTGATCAAGATCCAGGTCCAGCCACTACAACCAATCCTTCTATGAATGGGGGGAGTACATTGTCCAGTCACGGTAATTCAATGCCAACATACAATTATCATGACTGTAAAGATCCATTATTGGAGAATGCAACCACCGGTGCCATTTTCCAATCTGATCTAACTTCTCTTTTGAGTCCTTTATCTTTAGCGGCTTCCTCTAAGAGCTTCCACAAGGCTAATGTTTCCACAAGGCTGTATGGCCTCTTCCTCTGCAGGGCTGATGTGTCGCAGGACACCTGCAAAAACTGTACCATAACTGCCAGCATAGAAATCAAAAGCAAGTGCGCATCGAATTCTAGCGCAGTAATCTGGTACGACGAATGCATGCTTAGGTACTCCAAGGAACAGTTTTTTGGGGTGGCACAAACTAAGCCATTAGTATTCGCTTGGAACATTGACGACAACAATAGCACTTCACCTACTGAAACTCATCTCAATGCACAAGCACTGATGTACCAGTTGATAGAACAAGCCTCAAGTAGGGATATGCTGTTCAGTGTAGGGAAATATACGGTAAATGATGGGTCCGAGGATAGATACGGGTTGGTGCAGTGTACAAGGGATATAAATCGCTCTTCATGTGCATCTTGTTTGTCTAAGTTGATGGAGAGAACTAAGACTTGTTGCGGACACAGTGTTGGGTGGCGCTTACTGGCTCCTACTTGCACTATAAGGTACGAGAAGGATATCTTCTATGATAGTTTAGAGCCACTAGTATCACCTAATACTAGCAAACCGATACTACCATCGAAAGGTCCGATACTACCATCGAAAGGTAAGGAATCGCAACTTGTTTATTTTGTGAATAACTACTTACGCTTAACCATTTTCTAA 4644 0.4307 MIPKYIELVILVSSLCLVSQVCYADPPFEICSSHENGRTFQNNLNNLLQSLPSNASASKFYNTSYGNATERVYGLYMCLDFISSKACQNCIATAIEDILKLCPQSQEAVLWEESCQMRYSNTNFIGTLNDTGNIGKDNVQNVSEPHKFQSSVNQMLSNLSATAAFNVSANMYATGEAPFGDETIYALVQCTRDLSANDCSKCLKSAMKDIPSCCYGSIGARVLSRSCYLRYEFYPFYLGATGPLSPSPRTNQGKNSSRSSKVWIITGIAVALFTRNKKTHKRDEAVFHHPDFPRLHGVISEDSPYIDFGSLCVATKNFSDSNKLGQGGFGPVYKGILSNEQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVLLFDPNERAKLVWTKCLDIIDGLARGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMAKIFAGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFAXGVLVLEIITGKHNAXFFHSKSTPSLLTYAWHLWNEGKGLELKDPLLGDSCQEDEFLRCMNIGLLCVQEDAYDRPSMSSVVLILKNESAMVGQPARPPFSVGKFNDNDGLHPHSKQCSITFLTDSDILLPHPIDTYCPTEFPLYSSNSTFDNNLKLLLGLLPSNTASKNGFYNTSVGDGQDKVYGQALCRGDITNSTVCKECIQKASQDLTKMCNSEDAIIWYELCQVRYSFQMFFTSMTYTGKYPNHNLKEKNISHTSGFDQVLAYLMNNLSQEAAFIPANNMFAAGEIQYSGSDGIKNKKLYGLVQCTRDISEGDCATCLSSALTELTQCCSFREGGIILSRTCNVRFESYRFFNQSSAKMLLFPTSKGGGKWKPWMFALTIVGSLLVLAVTILLCTACLLRKGDTGRDEERIERTLLQQLATSKSVAVTQEGDLISSDELLFMNLATIKDATDDFSDTNKLGQGGFGAVYKGVLPDGSEVAVKRLSKKSWQGIEELKNEVILIAKLQHKNLVRLLGCGLEGDEKFLIYEFMSNKSLDQFIFDPEKRSEFDWHTWYGIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDHEMVAKISDFGMARIFFENQNTANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVMLLEIINGKRNSGFYTTELAPTLLAYAWQLWNEERKLEFVDPVLLESCMACEVVKCMHIGLLCVQEDPELRPNMSSVVVLLGSEQMALPKPSQPVFSLGRAFHVDQDPGPATTTNPSMNGGSTLSSHGNSMPTYNYHDCKDPLLENATTGAIFQSDLTSLLSPLSLAASSKSFHKANVSTRLYGLFLCRADVSQDTCKNCTITASIEIKSKCASNSSAVIWYDECMLRYSKEQFFGVAQTKPLVFAWNIDDNNSTSPTETHLNAQALMYQLIEQASSRDMLFSVGKYTVNDGSEDRYGLVQCTRDINRSSCASCLSKLMERTKTCCGHSVGWRLLAPTCTIRYEKDIFYDSLEPLVSPNTSKPILPSKGPILPSKGKESQLVYFVNNYLRLTIF* 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2094 1547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1084 1096 IPR008271 GO:0004672|GO:0006468
Amo05g2094 1547 SUPERFAMILY Protein kinase-like (PK-like) 304 613 IPR011009 -
Amo05g2094 1547 Gene3D - 134 236 IPR038408 -
Amo05g2094 1547 Gene3D - 29 124 IPR038408 -
Amo05g2094 1547 Gene3D - 748 860 IPR038408 -
Amo05g2094 1547 Gene3D - 1396 1501 IPR038408 -
Amo05g2094 1547 Gene3D - 638 740 IPR038408 -
Amo05g2094 1547 Gene3D - 1286 1387 IPR038408 -
Amo05g2094 1547 Gene3D Transferase(Phosphotransferase) domain 1 1039 1242 - -
Amo05g2094 1547 Gene3D Transferase(Phosphotransferase) domain 1 394 598 - -
Amo05g2094 1547 Pfam Protein tyrosine and serine/threonine kinase 321 586 IPR001245 GO:0004672|GO:0006468
Amo05g2094 1547 Pfam Protein tyrosine and serine/threonine kinase 966 1232 IPR001245 GO:0004672|GO:0006468
Amo05g2094 1547 ProSiteProfiles Protein kinase domain profile. 318 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2094 1547 SMART serkin_6 318 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2094 1547 SMART serkin_6 963 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2094 1547 ProSiteProfiles Protein kinase domain profile. 963 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 1407 1498 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 34 121 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 140 233 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 648 737 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 1298 1384 IPR002902 -
Amo05g2094 1547 Pfam Salt stress response/antifungal 758 858 IPR002902 -
Amo05g2094 1547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 616 - -
Amo05g2094 1547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 644 1262 - -
Amo05g2094 1547 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1297 1509 - -
Amo05g2094 1547 CDD STKc_IRAK 324 591 - -
Amo05g2094 1547 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 616 - -
Amo05g2094 1547 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 644 1262 - -
Amo05g2094 1547 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1297 1509 - -
Amo05g2094 1547 CDD STKc_IRAK 969 1231 - -
Amo05g2094 1547 ProSitePatterns Protein kinases ATP-binding region signature. 969 991 IPR017441 GO:0005524
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 636 740 IPR002902 -
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 130 236 IPR002902 -
Amo05g2094 1547 MobiDBLite consensus disorder prediction 1259 1282 - -
Amo05g2094 1547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Amo05g2094 1547 MobiDBLite consensus disorder prediction 1261 1282 - -
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 1393 1501 IPR002902 -
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 1288 1387 IPR002902 -
Amo05g2094 1547 ProSiteProfiles Gnk2-homologous domain profile. 748 860 IPR002902 -
Amo05g2094 1547 Gene3D Phosphorylase Kinase; domain 1 290 393 - -
Amo05g2094 1547 Gene3D Phosphorylase Kinase; domain 1 925 1038 - -
Amo05g2094 1547 SUPERFAMILY Protein kinase-like (PK-like) 946 1233 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2094 Amo-Chr5 45857600 45866348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2094 15 612 Receptor kinase-like Gene Family AT4G05200 42.633 2.54e-161 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo05g2094 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2094 - - rcn:112201911 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2094 05 45857600 45866348 Amo15g0071 15 2410168 2413156 hybridization