Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2050 ATGGAATCCAATGGTGTAGACTATGCTTCCAAATTGCTTGAATCTCAAAGCCATGTATGGCACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATACATCCACCGCTTGATGCGGATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATTCCCTAACCGATGCATCTAAGTTGTTGCTCAAAGACAATCCTATGAGTCTTTTTCCTTTCTTGTCTGCCATGCTTGATCCCATTTTAACAAAGCCGTGGTACGATTTACCGGCATGGTTCAAAAACGATAGTCCCACATCGTTTTACATGAGGCATGGGATGGCACTTTGGGAATATGCTGGTGTTGAGCCAAGACTCAACAAGTTCTTCAATGATGCCATGGAAACCGATACTCCATTTATTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGAGTCTTTGGTTGATGTTGGTGGAGGCACAGGAACTATGACTAAGGCTATTGCTAAGGCATTTCCACAAATGGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTGATGGCTTGCAAGGAAGTGGGAATCTCAAATATGTTGGAGGTGATATGTTTGACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTTTATATTGCATGACTGGAATGATGAGAAATGTATCAAAATACTGAAGAACTGCAAAGAAGCAATCACAAGAAGCAAAGGAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTGGATGATGAAAAGAGTGATGGAGATAATAAATCAATTGAAACCCAACTTTTCTTTGATATGTTGATGATGGTAGAAGTCAACGGAAAAGAGAGAAATAAAAAAGAATGGGCAAACTTAATTTTCTCAGCTGGTTTTAGTAGCTACAAGATAAACTTATCAGCTTTGGGATTAAGATCTCTCATTGAAATCTTTCCATAA 1086 0.3895 MESNGVDYASKLLESQSHVWHHIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQYIHRLMRILTHSGFFSKQISSKGDPESSYSLTDASKLLLKDNPMSLFPFLSAMLDPILTKPWYDLPAWFKNDSPTSFYMRHGMALWEYAGVEPRLNKFFNDAMETDTPFISSILFDKCKGVFEGLESLVDVGGGTGTMTKAIAKAFPQMECVVFDLPHVVDGLQGSGNLKYVGGDMFDSIPPSDAIFLKFILHDWNDEKCIKILKNCKEAITRSKGRKGKVIVIDMVVDDEKSDGDNKSIETQLFFDMLMMVEVNGKERNKKEWANLIFSAGFSSYKINLSALGLRSLIEIFP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2050 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Amo05g2050 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Amo05g2050 361 Pfam O-methyltransferase domain 130 342 IPR001077 GO:0008171
Amo05g2050 361 PANTHER ORCINOL O-METHYLTRANSFERASE 7 361 - -
Amo05g2050 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 351 IPR029063 -
Amo05g2050 361 Gene3D - 2 106 IPR036388 -
Amo05g2050 361 PANTHER O-METHYLTRANSFERASE 7 361 IPR016461 GO:0008168
Amo05g2050 361 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
Amo05g2050 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Amo05g2050 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2050 Amo-Chr5 44263709 44265956 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2050 30 360 Monolignol Biosynthesis Gene Families AT5G54160 34.125 4.93e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2050 - K16040 gmx:100781008 509.22