Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2042 ATGGGAGAATTCAGAGTGAGTGTGATCAAAGAGGAAGTGGTGGCAGCCATGCTTCCCATGCAAGACCATTGGTTGCCATTCTCAAACCTTGACCTCCTTCTTCCACCGATTGATGCTAGCGTCTTCTTTTGCTACAATAACACCGCAATGCTGAGCTTTGGATCAATGATGGAGTCACTTAAGAATTCACTAGCTAAGGCTTTGGTTCCCTATTATGCTTTTGCTGGTGAGGTGGTGCAAAACTCCATGGGTGAACCTGAGCTTCTGTGCAATAACCGTGGGGTTGATTTTGTTGTGGCTGAGGCTGATGTTGAACTTCGGAGTCTTAACTTGTATAACCCTGATGAATCTGTTGAAGGAAAGCTTGTTCCAAAGAAGAAGCGTGGCGTGCTTGCTGTTCAGGTAACTTGGCTAAAGTGTGGTGGGTTAGTAGTAGGATGCACTTCTGACCATCGCATCGCCGATGCTTACAGTACAAACATGTTTCTTGTATCGTGGGCCCAGTTGGCCCAATCGACAGGGCTCAGTACCTTAACTCATCAACCTTGTTTTCGCCGCTCCCTCCTCAGTCCAAGACGTCCCCCCACTCTCCACCCTTCTGCTTCAATTGACCGCATGTATGTTCTCCTCACCGACCACCTTCCTCCACCACCTGAGCCCAATCCCAGTTCCGATCTCGGCCCAATCGTCAGCCGCATATATTTCATCACTGTTGAAGAACTTAACCGCATTCAGGCACTTGCAACCTCAAGTGGTGTCAAGCCCACAAAGCTTGTATCCTTCTCTGCATTCTTGTGGAAATTGGTTGCTACGGCGTCTGTTTCATCCAAAACTATTATTGATGTTGTTCAAAAAATATTATTTTCCTATATTTTCTCATACATACATACATATATATATATATATATATATATATATGATCTTCCGAGCTTGATTCAAGCCAATGATATGGGTATTGTGGTTGATGGAAGAAGAAGGCTGAGCAATGGCGACAAGAAAAAGGAAGCACTAATGAATTGTTACTTTGGCAACGTGGTTTCCATTCCATTTGATGGGGAACCAGTGGAGAAGTTAGCGGAAAAGACGCTGAGCCAGGTGGCCGAGCAGGTTCACGAGTTCCTAGAGGTGGCAACAACGGAAGAGCACTTCTTAGGGCTCAATGACTGGGTTGAAATACACCGCCCCGTACCGGCGGTGACCAGGATCTTTCATGAAACGTATGATGGACCGTGTTTTGTGGTGTCTTCAGGAAGAAGGTTTCTTGAGTCAAAGGTTGATTTTGGCTGGGGAAAGCCAATATTTGAATCATGCCATTTTCCATGGGGTGGTGGTTGTGGTTATGTGATGCCATTGCCTAGCCCTAAAGGGAATGGCGATTGGGTGCTCTATTTGCACCTTCACAAGAACCACTTGGAATTCATGGAGTCTCATTATTCTCATATATTTAGGCCTTTATCTTGGGATTACCTTTCCAACCAAATATGA 1485 0.4545 MGEFRVSVIKEEVVAAMLPMQDHWLPFSNLDLLLPPIDASVFFCYNNTAMLSFGSMMESLKNSLAKALVPYYAFAGEVVQNSMGEPELLCNNRGVDFVVAEADVELRSLNLYNPDESVEGKLVPKKKRGVLAVQVTWLKCGGLVVGCTSDHRIADAYSTNMFLVSWAQLAQSTGLSTLTHQPCFRRSLLSPRRPPTLHPSASIDRMYVLLTDHLPPPPEPNPSSDLGPIVSRIYFITVEELNRIQALATSSGVKPTKLVSFSAFLWKLVATASVSSKTIIDVVQKILFSYIFSYIHTYIYIYIYIYDLPSLIQANDMGIVVDGRRRLSNGDKKKEALMNCYFGNVVSIPFDGEPVEKLAEKTLSQVAEQVHEFLEVATTEEHFLGLNDWVEIHRPVPAVTRIFHETYDGPCFVVSSGRRFLESKVDFGWGKPIFESCHFPWGGGCGYVMPLPSPKGNGDWVLYLHLHKNHLEFMESHYSHIFRPLSWDYLSNQI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2042 494 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 285 - -
Amo05g2042 494 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 315 486 - -
Amo05g2042 494 Pfam Transferase family 5 280 - -
Amo05g2042 494 Pfam Transferase family 315 480 - -
Amo05g2042 494 Gene3D - 215 479 IPR023213 -
Amo05g2042 494 Gene3D - 4 202 IPR023213 -
Amo05g2042 494 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 285 - -
Amo05g2042 494 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 315 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2042 Amo-Chr5 44050920 44054662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2042 15 475 Monolignol Biosynthesis Gene Families AT5G48930 27.292 3.44e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2042 - - ahf:112746934 882.093