Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2041 ATGTATTTCTATTGTTATGGTTTGTTGGTTGTAGAATACACTCTTCCAAAGTTGTACATGAAGATGCAGTATTGTGTTTCCTATGCCATCCACTTTCATGTCGTGAGGGTGCGTTCTCGCACCGATAGGAGGAACTGCGAGCCACCACGGCACTTTGCCAGGCGTAGAGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCTTGCTGGTGGAGTAGGAGCTGCCCTTCAATATATTGAAGGCTGA 255 0.4902 MYFYCYGLLVVEYTLPKLYMKMQYCVSYAIHFHVVRVRSRTDRRNCEPPRHFARRRDDAPRPGQPGQAPRLAGGVGAALQYIEG* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2041 84 MobiDBLite consensus disorder prediction 41 75 - -
Amo05g2041 84 PANTHER 40S RIBOSOMAL PROTEIN S26 12 78 - -
Amo05g2041 84 PANTHER 40S RIBOSOMAL PROTEIN S26 12 78 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo05g2041 84 Pfam Ribosomal protein S26e 11 56 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo05g2041 84 Gene3D Ribosomal protein S26e 8 65 IPR038551 -
Amo05g2041 84 MobiDBLite consensus disorder prediction 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2041 Amo-Chr5 44045443 44046393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2041 13 67 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 74.545 1.54e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2041 K02976 - gmx:100784958 112.079