Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2040 ATGATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATGAATTTATGGAGGGAGCGTATTTTTCTGAAGCTGATCAGTCAGAAGATATCCTTGAAGCTGCTTATGCAGTTGACTCCGTGCAAGACATTACAACTTTGAATTTTAGTGAAAATTTTGCGGAAAAAATTGGTAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTGTATGCCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGGTGTGAAGCTCGAATGGATGTTAAATTTGTACCAAAAACTGGAAGAATGGAGTCATTTGGAATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGATATTTGTGAGATTCTCCGGTCATTGGTATTAAATAGATGGACAAAAAAGGTGAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGTTGTTGTTATTAGTCGTCAAAGTGCCTTGATGGAATTTTCTAAACAATTGGCTGCTGTTGCTGCTAAATCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAACCAATATAGGCCCAGGACAACCATCTAAGAAGAAGCGGCAACGTTGTAACAACATTCCTTGGCAAAAAGACATTGACAACAACGTTATAGAAGATGAAGCTAATGGTTCGGATGACGGCGACATGTATACCGAACCGACGGCTGAGTTAGATAGTGATAATTAG 855 0.3918 MMDEQNEFEQDFGDEFMEGAYFSEADQSEDILEAAYAVDSVQDITTLNFSENFAEKIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRQGFREEKYYTMEKRKKEPRLETRTGCEARMDVKFVPKTGRMESFGIPCEHIVKVLVDRDICEILRSLVLNRWTKKVKSALNDPSGFTRDVVVISRQSALMEFSKQLAAVAAKSGVAKSSNPYVHQTNIGPGQPSKKKRQRCNNIPWQKDIDNNVIEDEANGSDDGDMYTEPTAELDSDN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2040 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 145 - -
Amo05g2040 284 MobiDBLite consensus disorder prediction 261 284 - -
Amo05g2040 284 Pfam FAR1 DNA-binding domain 70 141 IPR004330 -
Amo05g2040 284 MobiDBLite consensus disorder prediction 224 254 - -
Amo05g2040 284 MobiDBLite consensus disorder prediction 224 284 - -
Amo05g2040 284 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 18 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2040 Amo-Chr5 44041819 44044079 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g2040 FAR1 2.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2040 - - ahf:114927759 298.516