Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2010 ATGAAGTTGCCACGGCCACTGCTGGTGGCGCTTTTGGTGCTGAGCCTGATCGTCGTTCCTTCAAAGGCAGACCTGGATGACTTTTTCAACGGCTTTGGCTTTCACTTCAGACATGGACGACAACAACAACAACAAGAACAACAAGAACAACAGGCTCAAGGAAATGATAATCAAGACCCGCCGGGAGCCCAAGTAAACGAGCCCAGGGGTTCATATATTGCTGGTGCATACGGCATGGGAGGATCGCCGCCGCCACCTCAAGCAGTGATAATTCCTGATTCGGCTGCTCAGCCTGCAGAGCCGGCTGATTTTAAGCCTGCACAGATGGTTATTACTAATAACTTAGGTGGTCTGTCGGTGGGGTTCTACGATAGAAGTTGCCCTAATGCAGAGAAGATTGTGGCTGATTGGTTGGCAGAACTTATAAAGACAAATCCATCTGCACCTGCTAACATTATTCGTCTTGCATTCCATGATTGTGCTGTTGGTGGTTGTGATGCCTCGATCTTGCTAGACTCCATTGGGCAAGGAGATAAAGTGGAGAAGGGTTCAATCTTCAACGGAATGAGCCTCAAAGGTGCCGATCTGATTGACGACCTAAAAATGAGATTGGAGGAAGAGTGTCCACAGACAGTGTCATGTGCAGATGCGATTGCTTTTTCAGCCAACGAGGCGATGGCAATAGCTGGGGGAGTCCGCCAGCGTCCTCTAGGAGGACGCAGGGACGCCCTCAACTCCCTGGCTACCGCGGCAGATCAGAACCTGGCCTCGCCGACTGCCACGATAGACCAGATGTCCGCCATCTTTAGGAGGCTGGGTTTCAATCAAGAGGAAATGGTGGTGCTCTTGGGTGCACACTCCGTTGGTACAGCACACTGTGATCTTTTCATGGATAGGGTTTACAACTTCAGAAACACGCAGAAGCCTGATCCAGTGCTTCCATTGCCATATGTGGAAGATTTGAGGAGACTTTGCGCTAATCCTGGAACACCACAATTCAGGAACCCTAATGTGAACTTTGATGAAACGCCTTATGCATTGGACAACCGCTACTTTAAGAACCTTGTACAGAACAAGGCTTTGTTGCTGTCGGATTCTTCGTTAAAAGATGATCCTAGGACGGGTCCCACCGTGAGACAGATGGCGGAAGATGATACGTTGTTCCCAAAGAGGTTTGCTGAGTTATTCACTAAGATGACTACTTTTAATGTGCTCACTGGTCTTCTTGGAGAAGTTAGGAAGACTTGTAGGTCCACCAATAATTGA 1266 0.4882 MKLPRPLLVALLVLSLIVVPSKADLDDFFNGFGFHFRHGRQQQQQEQQEQQAQGNDNQDPPGAQVNEPRGSYIAGAYGMGGSPPPPQAVIIPDSAAQPAEPADFKPAQMVITNNLGGLSVGFYDRSCPNAEKIVADWLAELIKTNPSAPANIIRLAFHDCAVGGCDASILLDSIGQGDKVEKGSIFNGMSLKGADLIDDLKMRLEEECPQTVSCADAIAFSANEAMAIAGGVRQRPLGGRRDALNSLATAADQNLASPTATIDQMSAIFRRLGFNQEEMVVLLGAHSVGTAHCDLFMDRVYNFRNTQKPDPVLPLPYVEDLRRLCANPGTPQFRNPNVNFDETPYALDNRYFKNLVQNKALLLSDSSLKDDPRTGPTVRQMAEDDTLFPKRFAELFTKMTTFNVLTGLLGEVRKTCRSTNN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2010 421 PRINTS Plant peroxidase signature 127 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 151 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 192 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 211 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 277 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 338 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 354 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Plant peroxidase signature 394 407 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 MobiDBLite consensus disorder prediction 39 64 - -
Amo05g2010 421 ProSiteProfiles Plant heme peroxidase family profile. 117 420 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Haem peroxidase superfamily signature 149 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Haem peroxidase superfamily signature 212 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Haem peroxidase superfamily signature 230 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Haem peroxidase superfamily signature 278 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PRINTS Haem peroxidase superfamily signature 340 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 MobiDBLite consensus disorder prediction 39 70 - -
Amo05g2010 421 ProSitePatterns Peroxidases proximal heme-ligand signature. 278 288 IPR019793 -
Amo05g2010 421 PANTHER PEROXIDASE 25-RELATED 99 418 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 Pfam Peroxidase 137 384 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 PANTHER PEROXIDASE 99 418 - -
Amo05g2010 421 SUPERFAMILY Heme-dependent peroxidases 117 420 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo05g2010 421 CDD secretory_peroxidase 117 419 IPR033905 GO:0004601|GO:0042744
Amo05g2010 421 Gene3D - 121 420 - -
Amo05g2010 421 Gene3D Peroxidase, domain 2 256 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2010 Amo-Chr5 43589395 43591579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2010 118 421 Peroxidase AT4G08770 39.806 2.38e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2010 K00430 - gmx:100802856 374.4