Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1982 AGGGTTACAACAGCACGGTGGAAGCGGGTGAGCCTGGCATTCCCTCCTCCTTCGGTGAGCAGTCATCATAGCTCGCTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCCAAAGAGGCAAGGGCTAGAATCAGATATGTTCACTTTTTACCTTTCAATCCTGTTGACAAGAGAACTTCTCTGACTTACATTGATGCTGATGGAAACTGGTACTGTGCCAGCAAAGGCGCTCCGGAGCAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGAAGTTCCTTCTTGGCAAGACAAAGATGCAAGTATCGCCACACTTCCCGTCGAAGAGTTAATTGAGAAAGCCAATGGATTTGCCGGAATCTTTCCAGTTTTGATGGGTCGTCTTTCTTCAATGTTCAATGGGTTGGCAAAATCACTGACAATTAAGAAAGGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGCAGAAGGAAGCAAAAAAGAATGAGTTCTTATTATGTAGCTCAGGTAATATTTATTTACACGGACATGAACAATGA 690 0.4449 RVTTARWKRVSLAFPPPSVSSHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEARARIRYVHFLPFNPVDKRTSLTYIDADGNWYCASKGAPEQIMNLCNLRDDAKKKVHAIIDKFAERGLRSLAISRQEVPSWQDKDASIATLPVEELIEKANGFAGIFPVLMGRLSSMFNGLAKSLTIKKGRNSERCSGREAAQKEAKKNEFLLCSSGNIYLHGHEQ* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1982 229 PANTHER CALCIUM-TRANSPORTING ATPASE 45 142 - -
Amo05g1982 229 Pfam Cation transport ATPase (P-type) 56 110 - -
Amo05g1982 229 PANTHER PLASMA MEMBRANE ATPASE 45 142 - -
Amo05g1982 229 PANTHER PLASMA MEMBRANE ATPASE 145 171 - -
Amo05g1982 229 PANTHER CALCIUM-TRANSPORTING ATPASE 145 171 - -
Amo05g1982 229 Gene3D - 27 163 IPR023299 GO:0000166
Amo05g1982 229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 45 170 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1982 Amo-Chr5 43045584 43047452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1982 45 149 Primary Pumps ATPases AT2G24520 75.238 1.28e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1982 K01535 - ahf:112801147 336.265