Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1980 AGGAATTGGAAAGCTAAGCAAGAAATATTAGCAATGGGTTCAAATAGTACAGGATGTCCGGCGGGCATGAAAGCGACGTCGAATGGGGTGTTTCAGGGAGACAATCCGCTTGACTACGCACTCCCTCTTGCAATCTTACAAATCTGCATGGTGGTTCTTCTTACTCGCCTCCTAGCATTCCTTCTTAAGCCACTAAGGCAGCCACGCGTGATTGCAGAAATTCTGGGTGGAATATTGCTTGGTCCATCAGCTCTAGGACGCAGCTCTGCTTTTCTGAACGCCGTGTTCCCATCCAAGAGCCTAACGGTCTTGGACACTTTGGCCAACATTGGCTTACTTTTCTTCATGTTCTTGATAGGACTGGAACTCGACCCGAAGTCCCTCGTTAGCAAAACAGGAAAGAAAGCTCTTGCCATTGCCCTTGCTGGGATCACATTCCCCTTCGTCTTGGGAATCGGGACATCTTTTGCACTTCGAGCAACAATCTCGCAGGGAGTCGATAAAGCACCTTTCTTTGTGTTCATGGGAGTCGCTCTCTCCATCACCGCCTTCCCCGTCCTGGCACGCATCTTGGCTGAGTTGAGGCTGCTTACCACTGAGGTTGGACGGATGGCCATGTCAGCAGCGGCTGTTAATGACGTGGCAGCGTGGATTCTTCTCGCCCTTGCGATTGCGCTCTCTGGCTCTGACTCTTCTCCACTTGTCTCCGTGTGGGTCCTCTTGTTCGGATGTGGCTTTGTAATCTGTTGCGCACTTGTTCTTCCTCCCATCTTCAGATGGATGTCTCGGCGCTGCTCTGAAGGCGAAGCCATCAACGAGTCCTACGTCTGTGCCACGTTGGCAACGGTCTTGGCAGCTGGTTTTGTCACTGACACCATTGGAATCCATGCTCTGTTTGGGGCATTTGTTGTTGGAGTTGTTCTTCCCAAGGAAGGCCCTTTTGCGGCTGCTCTTGTTGAGAAGGTTGAGGATCTTGTCTCTGGTCTCTTCCTTCCGTTGTACTTTGTGTCCAGTGGACTCAAGACAAATGTTGCCACCATTCGTGGCCTCAGGTCCTGGGGGCTCCTTCTTTTGGTCATATTCAATGCTTGCTTCGGTAAGATTGTTGGTACCATTGTCGTCTCCTTCTTTTGTAGGGTACCTTTTCAAGAATCATTGGCTCTCGGCTTTCTCATGAATACTAAGGGCTTGGTGGAGCTCATCGTCCTCAACATCGGTAAAGATAGGAAGGTATTAAATGACCAAACATTTGCAATTATGGTGCTGATGGCTATCTTCACAACATTCATCACCACGCCTTTGGTAATTGCAGTTTATAAACCGGCCAAGAGAATGGCAAAATCGGACTACAAATACAGAACAGTTAAGAGGAAAAACCCGGACACTCAACTGCGACTGATGGTGTGTTTCCACAGCACAAGGAACATCCCTTCAATGCTAAATCTGATCGAAGCCTCGCGCGGCACTGAAAAAAGGGAAGGCCTTTGCATATACGCATTGCATCTCATGGAGCTCACTGAGAGGCCTTCTGCTATATTGATGGTCCACAAAACCAGAAAGAATGGCCTACCCTTTTGGAACAACAACCATTCTAATGCGAATCAAATAGTGATTGAGTTTGAGGCTTTGAAGCAGCTAAGCAGAGTGTCGATTCGCCCCATGACTTCAATCTCATCCATCCCCAACATTCACGATGACGTATGCGCTTGTGCTGAGAGCAAGAGGGTTGCAATGGTAATTCTTCCATTTCACAAGCACCAAAGGGTTGATGGAACGTGGGAAACAACAAGAAGTGAATTCAGGTGGGTGAATAAGAAAGTTCTCGAGCATGCACCCTGCTCTGTGGGGATCTTGGTGGACCGGGGGCTTGGTGGGAGCACCCACGTGACAGCAAGTAATGTTTCATCTTCAATTACCATGCTCTTCTTTGGAGGCAACGACGATCAAGAGGCTCTTGCTTATGCTTTGAGAATGGCAGAGCATCCTGGTATCAACCTCACCATAGTGCACTTGATAGTAAGGTCCGAGGATGTTGGAGACATTGTCAGTGTCGTAGATATAAACGACAACGCATCATCATCAACGGATGAGATGCTGCTTTCTGAGGTCAAAGCAAAAAAGAGCTCATCCGTAAAGTTTGAAGAGAGAGTTGTGAAAAGCCTCGGTGAGATCATTGAGGTGGTTGGAGAGTACAGCAGAGGATGCAATTTGTTTGTGGTTGGTAGGGTGCCCAAAGGACACGTGGCGGTCACTTTGAACAATGTCAAATGCGAGTGTCCAGAATTGGGGCCACTATGCAACTTGTTAACCTCTCCGGAACTGCTCTCAACTTCAGCCTCGGTTTTGGTCGTGCAACACTATCATGCTCTATGCTCTAATGGATAA 2385 0.483 RNWKAKQEILAMGSNSTGCPAGMKATSNGVFQGDNPLDYALPLAILQICMVVLLTRLLAFLLKPLRQPRVIAEILGGILLGPSALGRSSAFLNAVFPSKSLTVLDTLANIGLLFFMFLIGLELDPKSLVSKTGKKALAIALAGITFPFVLGIGTSFALRATISQGVDKAPFFVFMGVALSITAFPVLARILAELRLLTTEVGRMAMSAAAVNDVAAWILLALAIALSGSDSSPLVSVWVLLFGCGFVICCALVLPPIFRWMSRRCSEGEAINESYVCATLATVLAAGFVTDTIGIHALFGAFVVGVVLPKEGPFAAALVEKVEDLVSGLFLPLYFVSSGLKTNVATIRGLRSWGLLLLVIFNACFGKIVGTIVVSFFCRVPFQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVIAVYKPAKRMAKSDYKYRTVKRKNPDTQLRLMVCFHSTRNIPSMLNLIEASRGTEKREGLCIYALHLMELTERPSAILMVHKTRKNGLPFWNNNHSNANQIVIEFEALKQLSRVSIRPMTSISSIPNIHDDVCACAESKRVAMVILPFHKHQRVDGTWETTRSEFRWVNKKVLEHAPCSVGILVDRGLGGSTHVTASNVSSSITMLFFGGNDDQEALAYALRMAEHPGINLTIVHLIVRSEDVGDIVSVVDINDNASSSTDEMLLSEVKAKKSSSVKFEERVVKSLGEIIEVVGEYSRGCNLFVVGRVPKGHVAVTLNNVKCECPELGPLCNLLTSPELLSTSASVLVVQHYHALCSNG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1980 794 CDD USP_Like 644 749 - -
Amo05g1980 794 Gene3D - 488 753 - -
Amo05g1980 794 Gene3D - 43 448 IPR038770 -
Amo05g1980 794 PANTHER CATION/H(+) ANTIPORTER 18 15 789 - -
Amo05g1980 794 Pfam Sodium/hydrogen exchanger family 50 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo05g1980 794 PANTHER CATION/H + ANTIPORTER 15 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1980 Amo-Chr5 42953122 42955589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1980 12 789 Antiporter Super Family AT4G23700 66.750 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1980 - - tcc:18606628 1097.42