Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1948 ATGATGGAGTTTCATTTCTCATCATTCTCCATCATCCTTCAAAGTCCTATTATCATTATCATCTTAATCTCTTTGATCCTCAAGTTGGGAAGAAAGAGATTCAAAACTAATGGCAGAGCATCAAGTAATAATCTTCCACCAGGCCCATGGAAGCTACCAATTCTCGGAAGCATCCACCATCTCATCGGCGATCTTCCACACCGCCGCCTAACAAAACTATCCAAAAAACATGGCCCCATAATCCACATGCAGCTCGGAGAGACACCAGCCATAGTCATTTCTTCACCGGAGATCGCCAAACTGCTCTTCAAAACCCATGACACCGCCTTCGCTCAACGGCCTCAGTTTCCCGCCATTGAAGCTCTAACTTATGGTTGGTCAGATCTTGCGTTTTCGCCATACGGAAACTTCTGGAAGCAGGTAAGGAAGATTTGCACGGTGGAATTGTTGAGCGCCAAGCGCGTTAGATCCTTCAAGTTCATAAGAATGGAAGAGGTTTCAAGCTTAGTAAGATCTGTCTCCATGAACGTTGGTTCATCCATCAACCTCACTGAGATGTTCTTGAACATGTCATATAGCATCATAGCGAGAGTCATATTCGGAAAGAAAACGAAGGATCAAGACGCATATGTTTCAATCATCAAGGAAACTTTAACATCTTCATCACTTGCTTTTGGTGTTAGTAACTTGTTTCCTTCTCAGAAATGGTTGCATGTGATTAGTGGAGTGGAATGTAAAGTGAAGGAGATGCATAGAACATGTGATAAGGTTCTTGATGATATCATTGATGAAGCAACATCAAAGATAGATGGAGATGGAGATGGTAGTCTTCTGTGTATTCTTTTGAGACTCAAAGAAAATGGTGCTTGTGAATTTCAATTGACAAATGATAATATTAAAGCTATTCTTCAGGACATGTTAATTGCGGGAGGTGAAACTACATCTTTAACTGTGGAATGGATTTTCTCTGAGATGCTAAAAAATCCAAGAGTGCTGAAGAAAGCACAAGCAGAAGTTAGGGAAGTTTTTGGTAACAAAGGTTGA 1044 0.41 MMEFHFSSFSIILQSPIIIIILISLILKLGRKRFKTNGRASSNNLPPGPWKLPILGSIHHLIGDLPHRRLTKLSKKHGPIIHMQLGETPAIVISSPEIAKLLFKTHDTAFAQRPQFPAIEALTYGWSDLAFSPYGNFWKQVRKICTVELLSAKRVRSFKFIRMEEVSSLVRSVSMNVGSSINLTEMFLNMSYSIIARVIFGKKTKDQDAYVSIIKETLTSSSLAFGVSNLFPSQKWLHVISGVECKVKEMHRTCDKVLDDIIDEATSKIDGDGDGSLLCILLRLKENGACEFQLTNDNIKAILQDMLIAGGETTSLTVEWIFSEMLKNPRVLKKAQAEVREVFGNKG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1948 347 Pfam Cytochrome P450 46 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PANTHER CYTOCHROME P450 71B11-RELATED 14 347 - -
Amo05g1948 347 SUPERFAMILY Cytochrome P450 46 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 Gene3D Cytochrome P450 38 347 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1948 347 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 14 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1948 Amo-Chr5 42204861 42205998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1948 37 346 Cytochrome P450 AT5G25140 39.752 1.90e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1948 - K23806 pvy:116123437 337.421