Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1947 ATGGATCTTGAAGAATTGAAATTTCTAAAAGCAGTGATTAAAGAAAGTATGAGACTACACCCTCCAACTCCTGTGTTACTTCCAAAAGAGTGCCTTAAATATTGTGAGATCAATGGATACACAATACCAGTTGGAACTCAAGTGTTTGTAAATGCATGGGCAATTGGAAGAGATCCCAAATATTGGAGTGAAGCAGAGAGATTCTATCCTGAGAGATTCTTGGATAGTGAAATTGATTACAAAGGATCCCATTTTGAATTCATCCCATTTGGTGCAGGGAAGAGAATGTGTCCTGGCATTTCATTTGCTGAACCTAATATTGAACTTCCACTTGCACAATTATTTAAGAACTTGATACTGTGA 363 0.3691 MDLEELKFLKAVIKESMRLHPPTPVLLPKECLKYCEINGYTIPVGTQVFVNAWAIGRDPKYWSEAERFYPERFLDSEIDYKGSHFEFIPFGAGKRMCPGISFAEPNIELPLAQLFKNLIL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1947 120 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS P450 superfamily signature 11 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS P450 superfamily signature 88 97 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS E-class P450 group I signature 87 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS E-class P450 group I signature 97 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS E-class P450 group I signature 10 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PRINTS E-class P450 group I signature 51 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 Gene3D Cytochrome P450 2 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 115 - -
Amo05g1947 120 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 90 99 IPR017972 GO:0005506|GO:0016705
Amo05g1947 120 SUPERFAMILY Cytochrome P450 2 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 Pfam Cytochrome P450 2 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1947 120 PANTHER CYTOCHROME P450 71B11-RELATED 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1947 Amo-Chr5 42200190 42201164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1947 2 115 Cytochrome P450 AT3G26310 55.263 6.61e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1947 - K23807 qsu:111986207 187.578