Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1946 ATGAAGAGGATTTTGAGAACGAATGAGAATTTCAATGTTAGTAACATCTTCCCTTCCCAAAAGTGGCTGCATAGGATTAACGGAGCCATGCGTGAATTGGAGGATATGCATAGAACAAGTGATAGAATTCTTGATGATATCATTGCTGCAGCAAAATCCAAGACTGGTAATGCAGATGGCACTCTTCTCTCTTTTCTTTTGAGTCTCGAAGCAGATAACTGCACCCCTGAATTTCAATTCTCAAGAAACAACGTTAAAGCTCTTCTTCAGGACATGCTACTTGCTGGGAGTGAGACATCATCTTCAACTATGGAATGGGTTTTTTCAGAGATGCTAAAAAATCCAAGAGTGCTAAAAAAGGCACAAGCAGAAATTAGAGAAGTTTTCGGTAACAAAGATTATGTGGACGAGAATGATCTTGGGGAACTTCAATTTCTAAAAGCAATTATTAAAGAAAGTATGAGACTACATCCTCCAGGTGGTGCTTTACTTCCAAGAGAATGTCGAGAAACTTGTGAGATCAATGGATACACAATACCAGCAGGAACCCAAGTGCTTGTGAATTCATGGGCAATTGGAAGAGATCCCAAGTATTGGAATGAAGCAGAGAAATTCTATCCTGAGAGGTTCTTGGATAGTGAAATTGACTACAAAGGATCCCATTTTGAATTCATCCCATTTGGTGCAGGAAAGAGAATGTGTCCTGGCATGTTATTTGCTCTACCAAACATTGAACTTCCACTTGCACAATTGCTATACTATTTTGATTGGGATCTTCCCTTTGGAGTTAGTCATGAGAATTTGGACATGATAGAAGATTTTGGCATTACTATGAGAAGGAAAAATGATTTATTTGTGGTTCCCATTTCACATCATCATTTGCCACTTGAATAA 894 0.3848 MKRILRTNENFNVSNIFPSQKWLHRINGAMRELEDMHRTSDRILDDIIAAAKSKTGNADGTLLSFLLSLEADNCTPEFQFSRNNVKALLQDMLLAGSETSSSTMEWVFSEMLKNPRVLKKAQAEIREVFGNKDYVDENDLGELQFLKAIIKESMRLHPPGGALLPRECRETCEINGYTIPAGTQVLVNSWAIGRDPKYWNEAEKFYPERFLDSEIDYKGSHFEFIPFGAGKRMCPGMLFALPNIELPLAQLLYYFDWDLPFGVSHENLDMIEDFGITMRRKNDLFVVPISHHHLPLE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1946 297 PANTHER CYTOCHROME P450 71B11-RELATED 2 291 - -
Amo05g1946 297 Pfam Cytochrome P450 9 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 224 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 84 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 188 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 234 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS E-class P450 group I signature 104 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS P450 superfamily signature 225 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS P450 superfamily signature 234 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS P450 superfamily signature 95 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 291 - -
Amo05g1946 297 SUPERFAMILY Cytochrome P450 10 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 Gene3D Cytochrome P450 1 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g1946 297 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 227 236 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1946 Amo-Chr5 42193489 42195710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1946 10 294 Cytochrome P450 AT3G26330 42.215 8.26e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1946 - K23807 gmx:100779851 347.051