Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1921 ATGGTATTAGGTCTGACCAACTTAATACTGATGATTGGTCCGGTGGTGATCTGCGGAGGTAAAATTCGTTGTGGGTCGTTGTCGCGACACCTATTAGAAATTGACTCGGAGAAGGCGCTAGTTGGAGGTGAAAGCGGAAAAAGCAATGGGGGTCATTTGGCGTCGTATCTGAGTAGGCGCGGATTGGAGAAGGCTATGTGGGTGGAATTGAACATCAAGGTGTCGGAGCGTGGCAGCAAAGGGAACTTGGATTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCTGAAGAGGAAGAGGAAGAGGTCTTTAATGGGTTAGAGTCACCGTCACGAGTGGGCAAGGAGAGTGAGCCGGTAGAGAGAGTTGATGTATTTGGTGAAGGAGACAATGGTGGCAGAATGCGTTCATCGGAGTCACCAGGTGGTTCAGGCGATCAAATGAGTGATGATGTGCTTTCTTCGATGCTTTCAACTGCGGCTGCATTGGCCGATGTCGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGAAGTATGCAAAGGCGACTGGATTTGCTGATCGAAAAGGGGATTCCATTAAAGATGATGAAGACAATGTTATGAGGAAATTTTTCTATTGCAATCGACAGGGCTTGCGGGAGAAGAAGCATTATGAGAGGGCGGATAGGAAGAAGGCGCATAAGGTAGAGACTAGGACCAACTGTAGTGCGAAGTTCGTTGTATTTTTAGACAAACAGAGTGGCAAGTGGAGGACGAAGATATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCAGCCCACCGCAATATCAACAAAGGTGATAAAGTCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAGTCAGATCATGGGGTTCTTTGCATATTTGTCTGGG 933 0.4652 MVLGLTNLILMIGPVVICGGKIRCGSLSRHLLEIDSEKALVGGESGKSNGGHLASYLSRRGLEKAMWVELNIKVSERGSKGNLDFSGQWTDGWSSESEEEEEEVFNGLESPSRVGKESEPVERVDVFGEGDNGGRMRSSESPGGSGDQMSDDVLSSMLSTAAALADVEFHGVEEAYARYVKYAKATGFADRKGDSIKDDEDNVMRKFFYCNRQGLREKKHYERADRKKAHKVETRTNCSAKFVVFLDKQSGKWRTKIFVQDHNHDLTLPAFTNVMAAHRNINKGDKVHIHSMHEAGFQTSQIMGFFAYLSG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1921 311 Pfam FAR1 DNA-binding domain 179 267 IPR004330 -
Amo05g1921 311 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 95 270 - -
Amo05g1921 311 MobiDBLite consensus disorder prediction 125 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1921 Amo-Chr5 41776854 41781075 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g1921 FAR1 1.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1921 - - ahf:112803395 464.536