Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1913 ATGTGTTTGAATGATTTGCTTGCAGGGGTTGGTAATGCTGGTGTTGGTGTTCTTGATGCTATCTGTATGGAATCAAAGTGGAAGCTGTACTTGGGAAACAGTACAATCATGTATCCAGGTGACTTAATAGAAATGATAGTCTTTATTGTGCATGGAAAACTGGAGATCAAGGACAGCAGTGGAACAAGCGGCCACATATCTGATGGGGATGCATGTTGCCAAGGACTCCTTTTCTGGTATCTTCAGAGAGCTTTATCGAATAGTAACACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGCATAACTTGTTTAACAGATGTGGAGGTATTTGTAGTTGAAGTCACTGACCTTGAAAAGATCCTAACTCGGTTTACAAAATTCTTGCACACTCCACGTATTGAAGAGGCCATAAAAAGGCACAAAATGCTTGAAAGGCTGCATGAAGAATCAGGAAGCCACTTTGATTAG 489 0.4029 MCLNDLLAGVGNAGVGVLDAICMESKWKLYLGNSTIMYPGDLIEMIVFIVHGKLEIKDSSGTSGHISDGDACCQGLLFWYLQRALSNSNTDGDKLFFPEERFLSTKSITCLTDVEVFVVEVTDLEKILTRFTKFLHTPRIEEAIKRHKMLERLHEESGSHFD* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1913 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 17 147 - -
Amo05g1913 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 17 147 - -
Amo05g1913 162 SUPERFAMILY cAMP-binding domain-like 16 135 IPR018490 -
Amo05g1913 162 Gene3D Jelly Rolls 12 133 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1913 Amo-Chr5 41369789 41370609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1913 1 145 Ion Channels AT1G19780 29.221 2.98e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g1913 - K05391 egr:104456404 97.0561