Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g1906 ATGGCTGCCATGAACTCCTCTAGTGTATTGGCTTGTAGCTACGCCATTTCGGGTGGCGCTTCCAGTTCCGAGCTCAGTGGCAAGATTACTTCCTTGCCCTCTGTCTCCACCAAGTTGCCTGTGATRAAGGTGAAGGCCCAGCAAGAGAGAGCCCCCAAAGCCATSAAAGAATCTGAATTGGGAACAAGAAGAACCGCTCTTGTTTACTTGGCAGCCACACTTTTTGGCACTGCAGCTGCTGCTTCTTCTGCCAATGCTGGTGTCATTGAAGATTACCTTGAGAAGAGCAAGGCCAACAAGGAACTGAATGACAAGAAAAGGTTAGCTACTAGTGGAGCAAATTTTGCAAGAGCATACACGGTGCAATTTGGCACTTGCAAATTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCCTTTCTGATGATTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 516 0.4612 MAAMNSSSVLACSYAISGGASSSELSGKITSLPSVSTKLPVXKVKAQQERAPKAXKESELGTRRTALVYLAATLFGTAAAASSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g1906 171 Gene3D - 87 171 IPR044907 -
Amo05g1906 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 171 IPR008796 GO:0009522|GO:0015979
Amo05g1906 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g1906 Amo-Chr5 40363311 40364888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g1906 1 142 Calmodulin-binding Proteins AT5G64040 61.745 2.05e-52 163